Package org.broadinstitute.hellbender.tools.walkers.variantutils
package org.broadinstitute.hellbender.tools.walkers.variantutils
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ClassDescriptionCalculate genotype posterior probabilities given family and/or known population genotypesUtility to compute genotype posteriors given family priors.Left-align indels in a variant callsetA class to wrangle all the various and sundry genotype posterior options, mostly from CalculateGenotypePosteriorsCondense homRef blocks in a single-sample GVCFSelect a subset of variants from a VCF fileUpdates the reference contigs in the header of the VCF format file, i.e.Validate a VCF file with a strict set of criteriaExtract fields from a VCF file to a tab-delimited table