Package org.broadinstitute.hellbender.utils.activityprofile

package org.broadinstitute.hellbender.utils.activityprofile

Related Packages

Package	Description
org.broadinstitute.hellbender.utils

Class	Description
ActivityProfile	Class holding information about per-base activity scores for assembly region traversal
ActivityProfileState	Captures the probability that a specific locus in the genome represents an "active" site containing real variation.
ActivityProfileState.Type	The type of the value returned by ActivityProfileState.getResultValue()
ActivityProfileStateRange	An efficient way of representing a set of ActivityProfileStates in an interval; used by Spark.
BandPassActivityProfile	A band pass filtering version of the activity profile Applies a band pass filter with a Gaussian kernel to the input state probabilities to smooth them out of an interval