Package picard.arrays
package picard.arrays
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ClassesClassDescriptionCollects summary and per-sample metrics about variant calls in a VCF file.A simple program to combine multiple genotyping array VCFs into one VCF The input VCFs must have the same sequence dictionary and same list of variant loci.A simple program to create a standard picard metrics file from the output of bafRegressA simple program to create a standard picard metrics file from the output of VerifyIDIntensityClass to convert an Illumina GTC file into a VCF file.Class to take genotype calls from a ped file output from zCall and merge them into a vcf from autocall.A simple program to convert a Genotyping Arrays VCF to an ADPC file (Illumina intensity data file).