Package picard.cmdline

package picard.cmdline
  • Classes
    Class
    Description
    CommandLineDefaults
    Embodies defaults for global values that affect how the Picard Command Line operates.
    CommandLineProgram
    Abstract class to facilitate writing command-line programs.
    CommandLineSyntaxTranslater
    Class for handling translation of Picard-style command line argument syntax to POSIX-style argument syntax; used for running tests written with Picard style syntax against the Barclay command line parser.
    PicardCommandLine
    This is the main class of Picard and is the way of executing individual command line programs.
    StandardOptionDefinitions
    A set of String constants in which the name of the constant (minus the _SHORT_NAME suffix) is the standard long Option name, and the value of the constant is the standard shortName.