org.bdgenomics.adam.rdd

fragment

package fragment

Visibility
  1. Public
  2. All

Type Members

  1. case class FragmentRDD(rdd: RDD[Fragment], sequences: SequenceDictionary, recordGroups: RecordGroupDictionary) extends AvroReadGroupGenomicRDD[Fragment, FragmentRDD] with Product with Serializable

    A genomic RDD that supports RDDs of Fragments.

Value Members

  1. object InterleavedFASTQInFormatter extends InFormatterCompanion[Fragment, FragmentRDD, InterleavedFASTQInFormatter] with Serializable

    InFormatter companion that creates an InFormatter that writes interleaved FASTQ.

Ungrouped