Hierarchy For All Packages

Package Hierarchies:

• org.obolibrary.robot,
• org.obolibrary.robot.checks,
• org.obolibrary.robot.exceptions,
• org.obolibrary.robot.export,
• org.obolibrary.robot.providers,
• org.obolibrary.robot.reason

Class Hierarchy

• java.lang.Object
  • org.semanticweb.owlapi.manchestersyntax.renderer.AbstractRenderer
    • org.semanticweb.owlapi.manchestersyntax.renderer.ManchesterOWLSyntaxObjectRenderer (implements org.semanticweb.owlapi.model.OWLObjectVisitor)
      • org.obolibrary.robot.ManchesterOWLSyntaxObjectHTMLRenderer
  • org.semanticweb.owlapi.util.AnnotationValueShortFormProvider (implements org.semanticweb.owlapi.util.ShortFormProvider)
    • org.obolibrary.robot.providers.QuotedAnnotationValueShortFormProvider
  • org.obolibrary.robot.CatalogXmlIRIMapper (implements org.semanticweb.owlapi.model.OWLOntologyIRIMapper)
  • org.obolibrary.robot.export.Cell
  • org.obolibrary.robot.export.Column
  • org.obolibrary.robot.providers.CURIEShortFormProvider (implements org.semanticweb.owlapi.util.ShortFormProvider)
  • org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • org.obolibrary.robot.CatalogElementHandler
  • org.obolibrary.robot.DiffOperation
  • org.obolibrary.robot.providers.EmptyIRIShortFormProvider (implements org.semanticweb.owlapi.util.IRIShortFormProvider)
  • org.obolibrary.robot.providers.EmptyShortFormProvider (implements org.semanticweb.owlapi.util.ShortFormProvider)
  • org.obolibrary.robot.reason.EquivalentClassReasoning
  • org.obolibrary.robot.ExplainOperation
  • org.obolibrary.robot.ExportOperation
  • org.obolibrary.robot.ExtractOperation
  • org.obolibrary.robot.FilterOperation
  • org.semanticweb.owlapi.util.InferredEntityAxiomGenerator<E,A> (implements org.semanticweb.owlapi.util.InferredAxiomGenerator<A>)
    • org.semanticweb.owlapi.util.InferredClassAxiomGenerator<A>
      • org.obolibrary.robot.reason.InferredSubClassAxiomGeneratorIncludingIndirect
    • org.semanticweb.owlapi.util.InferredIndividualAxiomGenerator<A>
      • org.obolibrary.robot.reason.InferredClassAssertionAxiomGeneratorDirectOnly
    • org.semanticweb.owlapi.util.InferredObjectPropertyAxiomGenerator<A>
      • org.obolibrary.robot.reason.InferredSubObjectPropertyAxiomGeneratorIncludingIndirect
  • org.obolibrary.robot.checks.InvalidReferenceChecker
  • org.obolibrary.robot.checks.InvalidReferenceViolation
  • org.obolibrary.robot.IOHelper
  • org.obolibrary.robot.providers.IRIValueShortFormProvider (implements org.semanticweb.owlapi.util.ShortFormProvider)
  • org.obolibrary.robot.MaterializeOperation
  • org.obolibrary.robot.MergeOperation
  • org.obolibrary.robot.MireotOperation
  • org.obolibrary.robot.MirrorOperation
  • org.obolibrary.robot.OntologyHelper
  • org.obolibrary.robot.OptionsHelper
  • org.obolibrary.robot.PythonOperation
  • org.obolibrary.robot.QueryOperation
  • org.obolibrary.robot.QuotedEntityChecker (implements org.semanticweb.owlapi.expression.OWLEntityChecker)
  • org.obolibrary.robot.ReasonerHelper
  • org.obolibrary.robot.ReasonOperation
  • org.obolibrary.robot.ReduceOperation
  • org.obolibrary.robot.RelatedObjectsHelper
  • org.obolibrary.robot.RelaxOperation
  • org.obolibrary.robot.RenameOperation
  • org.obolibrary.robot.RepairOperation
  • org.obolibrary.robot.checks.Report
  • org.obolibrary.robot.ReportOperation
  • org.obolibrary.robot.export.Row
  • org.obolibrary.robot.export.Table
  • org.obolibrary.robot.Template
  • org.obolibrary.robot.TemplateHelper
  • org.obolibrary.robot.TemplateOperation
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.obolibrary.robot.exceptions.ColumnException
      • org.obolibrary.robot.exceptions.OntologyLogicException
        • org.obolibrary.robot.exceptions.IncoherentRBoxException
        • org.obolibrary.robot.exceptions.IncoherentTBoxException
        • org.obolibrary.robot.exceptions.InconsistentOntologyException
      • org.obolibrary.robot.exceptions.OntologyStructureException
        • org.obolibrary.robot.exceptions.InvalidReferenceException
      • org.obolibrary.robot.exceptions.RowParseException
      • java.lang.RuntimeException
        • org.obolibrary.robot.exceptions.CannotReadQuery
  • org.obolibrary.robot.Tuple<A,B> (implements java.util.Collection<E>)
  • org.obolibrary.robot.UnmergeOperation
  • org.obolibrary.robot.checks.Violation

Interface Hierarchy

• org.obolibrary.robot.reason.EquivalentAxiomReasoningTest

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.obolibrary.robot.RelationType
    • org.obolibrary.robot.checks.InvalidReferenceViolation.Category
    • org.obolibrary.robot.export.RendererType
    • org.obolibrary.robot.reason.EquivalentClassReasoningMode