Package ome.xml.model
Class Image
java.lang.Object
ome.xml.model.AbstractOMEModelObject
ome.xml.model.Image
- All Implemented Interfaces:
OMEModelObject
public class Image extends AbstractOMEModelObject
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Field Summary
Fields Modifier and Type Field Description static java.lang.String
NAMESPACE
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Constructor Summary
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Method Summary
Methods inherited from class ome.xml.model.AbstractOMEModelObject
getChildrenByTagName, stripNamespacePrefix
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Field Details
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NAMESPACE
public static final java.lang.String NAMESPACE- See Also:
- Constant Field Values
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Constructor Details
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Image
public Image()Default constructor. -
Image
Constructs Image recursively from an XML DOM tree.- Parameters:
element
- Root of the XML DOM tree to construct a model object graph from.model
- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException
- If there is an error instantiating an enumeration during model object creation.
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Image
Copy constructor.
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Method Details
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update
Updates Image recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.- Specified by:
update
in interfaceOMEModelObject
- Overrides:
update
in classAbstractOMEModelObject
- Parameters:
element
- Root of the XML DOM tree to construct a model object graph from.model
- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException
- If there is an error instantiating an enumeration during model object creation.
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link
Description copied from interface:OMEModelObject
Link a given OME model object to this model object.- Specified by:
link
in interfaceOMEModelObject
- Overrides:
link
in classAbstractOMEModelObject
- Parameters:
reference
- The type qualifier for the reference. This should be the corresponding reference type foro
. If, for example,o
is of typeImage
,reference
MUST be of typeImageRef
.o
- Model object to link to.- Returns:
true
if this model object was able to handle the reference,false
otherwise.
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getID
public java.lang.String getID() -
setID
public void setID(java.lang.String id) -
getName
public java.lang.String getName() -
setName
public void setName(java.lang.String name) -
getAcquisitionDate
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setAcquisitionDate
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getLinkedExperimenter
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linkExperimenter
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unlinkExperimenter
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getDescription
public java.lang.String getDescription() -
setDescription
public void setDescription(java.lang.String description) -
getLinkedExperiment
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linkExperiment
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unlinkExperiment
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getLinkedExperimenterGroup
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linkExperimenterGroup
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unlinkExperimenterGroup
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getLinkedInstrument
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linkInstrument
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unlinkInstrument
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getObjectiveSettings
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setObjectiveSettings
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getImagingEnvironment
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setImagingEnvironment
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getStageLabel
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setStageLabel
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getPixels
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setPixels
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sizeOfLinkedROIList
public int sizeOfLinkedROIList() -
copyLinkedROIList
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getLinkedROI
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setLinkedROI
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linkROI
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unlinkROI
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sizeOfLinkedMicrobeamManipulationList
public int sizeOfLinkedMicrobeamManipulationList() -
copyLinkedMicrobeamManipulationList
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getLinkedMicrobeamManipulation
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setLinkedMicrobeamManipulation
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linkMicrobeamManipulation
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unlinkMicrobeamManipulation
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sizeOfLinkedAnnotationList
public int sizeOfLinkedAnnotationList() -
copyLinkedAnnotationList
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getLinkedAnnotation
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setLinkedAnnotation
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linkAnnotation
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unlinkAnnotation
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sizeOfLinkedDatasetList
public int sizeOfLinkedDatasetList() -
copyLinkedDatasetList
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getLinkedDataset
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setLinkedDataset
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linkDataset
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unlinkDataset
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sizeOfLinkedFolderList
public int sizeOfLinkedFolderList() -
copyLinkedFolderList
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getLinkedFolder
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setLinkedFolder
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linkFolder
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unlinkFolder
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sizeOfLinkedWellSampleList
public int sizeOfLinkedWellSampleList() -
copyLinkedWellSampleList
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getLinkedWellSample
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setLinkedWellSample
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linkWellSample
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unlinkWellSample
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asXMLElement
public org.w3c.dom.Element asXMLElement(org.w3c.dom.Document document)Description copied from interface:OMEModelObject
Takes the entire object hierarchy and produces an XML DOM tree.- Specified by:
asXMLElement
in interfaceOMEModelObject
- Specified by:
asXMLElement
in classAbstractOMEModelObject
- Parameters:
document
- Destination document for element creation, etc.- Returns:
- XML DOM tree root element for this model object.
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asXMLElement
public org.w3c.dom.Element asXMLElement(org.w3c.dom.Document document, org.w3c.dom.Element Image_element)Description copied from class:AbstractOMEModelObject
Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.- Overrides:
asXMLElement
in classAbstractOMEModelObject
- Parameters:
document
- Destination document for element creation, etc.Image_element
- Element from the subclass. Ifnull
a new element will be created of this class.- Returns:
element
populated with properties from this class.
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