Package ome.xml.model
Class NumericAnnotation
java.lang.Object
ome.xml.model.AbstractOMEModelObject
ome.xml.model.Annotation
ome.xml.model.BasicAnnotation
ome.xml.model.NumericAnnotation
- All Implemented Interfaces:
OMEModelObject
- Direct Known Subclasses:
DoubleAnnotation
,LongAnnotation
public abstract class NumericAnnotation extends BasicAnnotation
-
Field Summary
Fields Modifier and Type Field Description static java.lang.String
NAMESPACE
-
Constructor Summary
Constructors Constructor Description NumericAnnotation()
Default constructor.NumericAnnotation(NumericAnnotation orig)
Copy constructor.NumericAnnotation(org.w3c.dom.Element element, OMEModel model)
Constructs NumericAnnotation recursively from an XML DOM tree. -
Method Summary
Modifier and Type Method Description org.w3c.dom.Element
asXMLElement(org.w3c.dom.Document document)
Takes the entire object hierarchy and produces an XML DOM tree.org.w3c.dom.Element
asXMLElement(org.w3c.dom.Document document, org.w3c.dom.Element NumericAnnotation_element)
Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.boolean
link(Reference reference, OMEModelObject o)
Link a given OME model object to this model object.void
update(org.w3c.dom.Element element, OMEModel model)
Updates NumericAnnotation recursively from an XML DOM tree.Methods inherited from class ome.xml.model.Annotation
copyLinkedAnnotationList, copyLinkedChannelList, copyLinkedDatasetList, copyLinkedDetectorList, copyLinkedDichroicList, copyLinkedExperimenterGroupList, copyLinkedExperimenterList, copyLinkedFilterList, copyLinkedFolderList, copyLinkedImageList, copyLinkedInstrumentList, copyLinkedLightPathList, copyLinkedLightSourceList, copyLinkedObjectiveList, copyLinkedPlaneList, copyLinkedPlateAcquisitionList, copyLinkedPlateList, copyLinkedProjectList, copyLinkedReagentList, copyLinkedROIList, copyLinkedScreenList, copyLinkedShapeList, copyLinkedWellList, getAnnotator, getDescription, getID, getLinkedAnnotation, getLinkedChannel, getLinkedDataset, getLinkedDetector, getLinkedDichroic, getLinkedExperimenter, getLinkedExperimenterGroup, getLinkedFilter, getLinkedFolder, getLinkedImage, getLinkedInstrument, getLinkedLightPath, getLinkedLightSource, getLinkedObjective, getLinkedPlane, getLinkedPlate, getLinkedPlateAcquisition, getLinkedProject, getLinkedReagent, getLinkedROI, getLinkedScreen, getLinkedShape, getLinkedWell, getNamespace, linkAnnotation, linkChannel, linkDataset, linkDetector, linkDichroic, linkExperimenter, linkExperimenterGroup, linkFilter, linkFolder, linkImage, linkInstrument, linkLightPath, linkLightSource, linkObjective, linkPlane, linkPlate, linkPlateAcquisition, linkProject, linkReagent, linkROI, linkScreen, linkShape, linkWell, setAnnotator, setDescription, setID, setLinkedAnnotation, setLinkedChannel, setLinkedDataset, setLinkedDetector, setLinkedDichroic, setLinkedExperimenter, setLinkedExperimenterGroup, setLinkedFilter, setLinkedFolder, setLinkedImage, setLinkedInstrument, setLinkedLightPath, setLinkedLightSource, setLinkedObjective, setLinkedPlane, setLinkedPlate, setLinkedPlateAcquisition, setLinkedProject, setLinkedReagent, setLinkedROI, setLinkedScreen, setLinkedShape, setLinkedWell, setNamespace, sizeOfLinkedAnnotationList, sizeOfLinkedChannelList, sizeOfLinkedDatasetList, sizeOfLinkedDetectorList, sizeOfLinkedDichroicList, sizeOfLinkedExperimenterGroupList, sizeOfLinkedExperimenterList, sizeOfLinkedFilterList, sizeOfLinkedFolderList, sizeOfLinkedImageList, sizeOfLinkedInstrumentList, sizeOfLinkedLightPathList, sizeOfLinkedLightSourceList, sizeOfLinkedObjectiveList, sizeOfLinkedPlaneList, sizeOfLinkedPlateAcquisitionList, sizeOfLinkedPlateList, sizeOfLinkedProjectList, sizeOfLinkedReagentList, sizeOfLinkedROIList, sizeOfLinkedScreenList, sizeOfLinkedShapeList, sizeOfLinkedWellList, unlinkAnnotation, unlinkChannel, unlinkDataset, unlinkDetector, unlinkDichroic, unlinkExperimenter, unlinkExperimenterGroup, unlinkFilter, unlinkFolder, unlinkImage, unlinkInstrument, unlinkLightPath, unlinkLightSource, unlinkObjective, unlinkPlane, unlinkPlate, unlinkPlateAcquisition, unlinkProject, unlinkReagent, unlinkROI, unlinkScreen, unlinkShape, unlinkWell
Methods inherited from class ome.xml.model.AbstractOMEModelObject
getChildrenByTagName, stripNamespacePrefix
-
Field Details
-
NAMESPACE
public static final java.lang.String NAMESPACE- See Also:
- Constant Field Values
-
-
Constructor Details
-
NumericAnnotation
public NumericAnnotation()Default constructor. -
NumericAnnotation
Constructs NumericAnnotation recursively from an XML DOM tree.- Parameters:
element
- Root of the XML DOM tree to construct a model object graph from.model
- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException
- If there is an error instantiating an enumeration during model object creation.
-
NumericAnnotation
Copy constructor.
-
-
Method Details
-
update
Updates NumericAnnotation recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.- Specified by:
update
in interfaceOMEModelObject
- Overrides:
update
in classBasicAnnotation
- Parameters:
element
- Root of the XML DOM tree to construct a model object graph from.model
- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException
- If there is an error instantiating an enumeration during model object creation.
-
link
Description copied from interface:OMEModelObject
Link a given OME model object to this model object.- Specified by:
link
in interfaceOMEModelObject
- Overrides:
link
in classBasicAnnotation
- Parameters:
reference
- The type qualifier for the reference. This should be the corresponding reference type foro
. If, for example,o
is of typeImage
,reference
MUST be of typeImageRef
.o
- Model object to link to.- Returns:
true
if this model object was able to handle the reference,false
otherwise.
-
asXMLElement
public org.w3c.dom.Element asXMLElement(org.w3c.dom.Document document)Description copied from interface:OMEModelObject
Takes the entire object hierarchy and produces an XML DOM tree.- Specified by:
asXMLElement
in interfaceOMEModelObject
- Overrides:
asXMLElement
in classBasicAnnotation
- Parameters:
document
- Destination document for element creation, etc.- Returns:
- XML DOM tree root element for this model object.
-
asXMLElement
public org.w3c.dom.Element asXMLElement(org.w3c.dom.Document document, org.w3c.dom.Element NumericAnnotation_element)Description copied from class:AbstractOMEModelObject
Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.- Overrides:
asXMLElement
in classBasicAnnotation
- Parameters:
document
- Destination document for element creation, etc.NumericAnnotation_element
- Element from the subclass. Ifnull
a new element will be created of this class.- Returns:
element
populated with properties from this class.
-