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App implementations.BasicDetails implementations.ConsoleArgument implementations.Contextual objects.Display implementations.DragAndDropData implementations.DragAndDropHandlers.Gateway implementations.HandlerPlugin implementations.HandlerServices.InputHarvesters.InputHarvester that implements the
PreprocessorPlugin interface.InputPanel implementations.IOPlugins.LogService.Module implementations.ModuleInfo implementation.ModuleItem implementations.PTServices.RichPlugin implementations.ScriptContext for use in the
AbstractScriptEngine.ScriptLanguage implementations.Service implementations.SingletonServices.TextFormat implementations.TypedPlugins.TypedServices.UIDetails implementations.InputWidget implementations that
belong to a specific UI.UserInterface implementations.WrapperPlugins.WrapperServices.KeyCode plus
InputModifiers.Display when there is one single unresolved
Display parameter.ScriptLanguage implementations which adapt an
existing ScriptEngineFactory.AdaptedScriptLanguage wrapping the given
ScriptEngineFactory.
AdaptedScriptLanguage wrapping the
ScriptEngineFactory with the given name.
AppService.UIDetails.APPLICATION_MENU_ROOT instead.
PrimitiveArray instances.Plugin annotation.boolean elements.InputPanel with widgets corresponding to the
given Module instance.
byte elements.ConversionUtils.canCast(Class, Class)
ConversionUtils.canCast(Object, Class)
CommandModule.preview() calls.
ConversionUtils.canConvert(Class, Class)
ConversionUtils.canConvert(Object, Class)
ConversionUtils.cast(Object, Class)
char elements.IllegalArgumentException if (data, display) pair is
incompatible.
Class objects and primitive types.CodeGenerator for Java.ColorRGB objects and related utility methods.org.scijava.annotations.AnnotationCombiner#combine() instead.
AnnotationCombiner instead.org.scijava.annotations.AnnotationCombiner#CombineAnnotations() instead.
Command is a plugin that is executable.Command.PluginInfo.
Command instance.PluginInfo.
CommandInfo, around the
specified Command instance.
ModuleItem implementation describing an input or output of a command.Prioritized objects.
Class objects using their fully qualified names.
ConversionUtils.convert(Object, Class)
ConversionUtils.convert(Object, Class) but capable of creating and populating
multi-element objects (Collections and array types).
DragAndDropData to the type of data object
supported by this handler.
InputPanel.
Commands.Displays.DragAndDropData, which provides a
UI-agnostic way to bundle an object together with its MIME type.EventService implementation for SciJava.InputService.IOService.MutableModule implementation, intended for subclassing.MutableModuleInfo implementation.MutableModuleItem implementation, for use with custom
MutableModule implementations.InputWidgets.PluginFinder to
this index, or does nothing if the attached PluginFiner is null.
Display.Display.Displays.DisplayPanel.AbstractUIInputWidget.refreshWidget() operation.
double elements.Display.
DragAndDropData, using the first available compatible handler.
Display.
Display.
DynamicCommand's associated
ModuleInfo.SciJavaEvent, without saving the event
itself (since doing so could leave dangling references).File using a UI prompt.float elements.LineOutputStream.println(String), stripping any trailing new-line characters.
ColorRGB object.
Context to provide
one-line access to a suite of Services.Gateway.Service, if it exists in
the underlying Context.
Service with the given class name,
if it exists in the underlying Context.
KeyCode.UNDEFINED if no such code.
KeyCode.UNDEFINED if no such
code.
Fields marked with the annotation of the
specified class.
Fields marked with the annotation of the
specified class.
Plugin annotation.
AnnotationCombiner.getAnnotationFiles() instead.
artifactId of the application.
Class of the objects that can
be created.
Commands).
Commands corresponding to the given plugins.
Commands of the given type.
Contextual.setContext(Context) has not yet been called on this object.
ImageDisplay.class).
ImageDisplay.class).
Display.
PluginIndex.discover().
groupId of the application.
DragAndDropData dragged onto the specified display.
MenuEntry.
PluginInfo metadata associated with the object.
Field corresponding to the given @Parameter
annotated module input, or null if the input does not exist or was not
declared using the @Parameter mechanism.
ScriptEngineFactory instances available from the Java scripting
framework itself.
ModuleInfo.
ConversionUtils.getNonprimitiveType(Class)
Class closest to the given type.
ConversionUtils.getNullValue(Class)
IOPlugin for opening data from the given
source.
Field corresponding to the given @Parameter
annotated module output, or null if the output does not exist or was not
declared using the @Parameter mechanism.
Class of the item objects, if that class has already
been loaded.
Service).
@Plugin annotation (i.e., Plugin.type()).
IOPlugin for saving data to the given
destination.
ScriptInfo metadata for the script at the given file, or
null if none.
ModuleItem if found, or null if not exactly
one unresolved input of that type.
ModuleItem if found, or null if not exactly
one unresolved output of that type.
HandlerPlugins of a particular type.PluginInfo metadata.CustomDrawnTools use IconDrawers to draw their icon on
screen.IconService allows a Tool to obtain the IconDrawer.Module input values, according to the
following steps:
Create an InputPanel with widgets corresponding to the module
inputs.
Present the panel, if in a UI context.
Harvest the final widget values from the panel, updating the
Module's input values to match the harvested values.
Perform any other needed processing of the results (marking inputs as
resolved, storing persisted values to preferences, etc.).
AbstractModuleInfo.outputMap, initializing if needed.
AbstractModuleInfo.inputMap, initializing if needed.
Instantiable cannot create an object.int elements.Command) which is intended to be run
interactively.Boolean or
boolean).
Character or
char).
ThreadService.invoke(java.lang.Runnable) and ThreadService.queue(java.lang.Runnable).
int, float
or any Number implementation.
String,
Character or char.
OutputStream.Lists.Instantiable.createInstance().
ClassLoader, or null if it cannot be loaded.
long elements.AnnotationCombiner.main(String[])
instead.
FileUtils.stripFilenameVersion(String)
Plugin's menu path.ShadowMenu structure
into a menu for a particular user interface.MenuPath.MenuService's
ShadowMenu.UIDetails.MenuService's ShadowMenu.MenuService's ShadowMenu.MenuService's ShadowMenu.Method, which can be invoked at will.Module execution has been canceled.Module directly (rather than using
the CommandModule adapter class).Module.Module
(but not a specific instance of it).ModulePostprocessor has been invoked as part of
a module execution.Module.ModulePreprocessor has been invoked as part of
a module execution.Module.ModuleProcessor has been invoked as part of a
module execution.ModulePreprocessor) or
following (see ModulePostprocessor) the module execution.Module, including pre- and
post-processing and event notification.ModuleService.ModuleService.ModuleService.Module extension allowing manipulation of its metadata.ModuleInfo extension allowing manipulation of its metadata.ModuleItem extension allowing manipulation of its metadata.Gateway cannot obtain a
Service.Context is null, but shouldn't be.Number objects.Object elements.ObjectService.ObjectService.ObjectService.--open command line argument.AbstractModuleInfo.outputList, initializing if needed.
AbstractModuleInfo.inputList, initializing if needed.
DefaultPluginFinder to
discover plugins.
PluginFinder to
discover plugins.
PluginService.PluginService.PluginService.ModulePostprocessors.
Module.ModulePreprocessors.
Module.Command) whose results can be previewed.ArrayList, but more performant.SciJavaPlugin.InputStream and either accumulates the read bytes
in a String or outputs to a PrintStream.Contextual, Prioritized plugins that
retain access to their associated PluginInfo metadata via the
HasPluginInfo interface.--run command line argument.Services.Reader.
IOPlugin for scripts.Module which executes a script.Service information from all JAR files on the classpath.Service.PluginInfo metadata associated with the object.
ModuleInfo.
Class of the item objects.
ShadowMenu hierarchies.short elements.Display for the given object, and shows it using an
appropriate UI widget of the default user interface.
Display for the given object, and shows it using an
appropriate UI widget of the default user interface.
Display using an appropriate UI widget
of the default user interface.
SingletonPlugins of a particular type.ArrayList whose size can be adjusted more efficiently.AbstractRichPlugin instead.LogService using the standard error stream.Strings of key/value pairs.EventHandler annotated
methods.
DragAndDropData can be dropped onto the
specified display.
DragAndDropData onto a compatible display.
DragAndDropData onto the specified display.
Display.
Displays.Strings.TextFormat is a plugin that provides handling for a text markup
language.IOPlugin for text conversion to HTML.Collection implementation.
Number of the specified type, or
null if the types are incompatible.
String unless a PrintStream was
specified in the constructor.
Class), which can be queried
at runtime.Class).TypedPlugin.--ui command line argument.UserInterface.UserInterface
inputs with the UIService's default UI instance, if compatible.URL to its corresponding File.
File.
Validated
object.SciJavaEvent indicating the first time an application is
run.InputWidget.InputWidgets.WrapperPlugins of a particular type.LineOutputStream.flush() the
current line if it is a new-line character.
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