public class SoftClip extends java.lang.Object implements java.io.Serializable, ReadFeature
CigarOperator.S
.Modifier and Type | Field and Description |
---|---|
static byte |
operator |
Constructor and Description |
---|
SoftClip() |
SoftClip(int position,
byte[] sequence) |
Modifier and Type | Method and Description |
---|---|
boolean |
equals(java.lang.Object obj) |
byte |
getOperator()
Read features are distinguished by operator, similar to cigar operator.
|
int |
getPosition() |
byte[] |
getSequence() |
void |
setPosition(int position) |
void |
setSequence(byte[] sequence) |
java.lang.String |
toString() |
public static final byte operator
public SoftClip()
public SoftClip(int position, byte[] sequence)
public byte[] getSequence()
public void setSequence(byte[] sequence)
public byte getOperator()
ReadFeature
getOperator
in interface ReadFeature
public int getPosition()
getPosition
in interface ReadFeature
public void setPosition(int position)
setPosition
in interface ReadFeature
public boolean equals(java.lang.Object obj)
equals
in class java.lang.Object
public java.lang.String toString()
toString
in class java.lang.Object