Package htsjdk.samtools

Enum Class SAMReadGroupRecord.PlatformValue

java.lang.Object

java.lang.Enum<SAMReadGroupRecord.PlatformValue>

htsjdk.samtools.SAMReadGroupRecord.PlatformValue

All Implemented Interfaces:

Serializable, Comparable<SAMReadGroupRecord.PlatformValue>, Constable

Enclosing class:

SAMReadGroupRecord

public static enum SAMReadGroupRecord.PlatformValue
extends Enum<SAMReadGroupRecord.PlatformValue>

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
BGI	Deprecated. Use DNBSEQ instead.
CAPILLARY	Capillary
DNBSEQ	MGI/BGI
ELEMENT	Element Biosciences
HELICOS	Helicos Biosciences
ILLUMINA	Illumina
IONTORRENT	Iontorrent
LS454	454 Life Sciences
ONT	Oxford Nanopore
OTHER	Deprecated. OTHER is not an official value.
PACBIO	Pacific Biotechnology
SINGULAR	Singular Genomics
SOLID	Life Technologies
ULTIMA	Ultima Genomics

Method Summary

Modifier and Type	Method	Description
static SAMReadGroupRecord.PlatformValue	valueOf(String name)	Returns the enum constant of this class with the specified name.
static SAMReadGroupRecord.PlatformValue[]	values()	Returns an array containing the constants of this enum class, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

BGI

@Deprecated
public static final SAMReadGroupRecord.PlatformValue BGI

Deprecated.

Use DNBSEQ instead.

CAPILLARY

public static final SAMReadGroupRecord.PlatformValue CAPILLARY

Capillary

DNBSEQ

public static final SAMReadGroupRecord.PlatformValue DNBSEQ

MGI/BGI

ELEMENT

public static final SAMReadGroupRecord.PlatformValue ELEMENT

Element Biosciences

HELICOS

public static final SAMReadGroupRecord.PlatformValue HELICOS

Helicos Biosciences

ILLUMINA

public static final SAMReadGroupRecord.PlatformValue ILLUMINA

Illumina

IONTORRENT

public static final SAMReadGroupRecord.PlatformValue IONTORRENT

Iontorrent

LS454

public static final SAMReadGroupRecord.PlatformValue LS454

454 Life Sciences

ONT

public static final SAMReadGroupRecord.PlatformValue ONT

Oxford Nanopore

OTHER

@Deprecated
public static final SAMReadGroupRecord.PlatformValue OTHER

Deprecated.

OTHER is not an official value. It is recommended to omit PL if it is not in this list or is unknown.

PACBIO

public static final SAMReadGroupRecord.PlatformValue PACBIO

Pacific Biotechnology

SINGULAR

public static final SAMReadGroupRecord.PlatformValue SINGULAR

Singular Genomics

SOLID

public static final SAMReadGroupRecord.PlatformValue SOLID

Life Technologies

ULTIMA

public static final SAMReadGroupRecord.PlatformValue ULTIMA

Ultima Genomics

Method Details

values

public static SAMReadGroupRecord.PlatformValue[] values()

Returns an array containing the constants of this enum class, in the order they are declared.

Returns:

an array containing the constants of this enum class, in the order they are declared

valueOf

public static SAMReadGroupRecord.PlatformValue valueOf(String name)

Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum class has no constant with the specified name

NullPointerException - if the argument is null