public class MendelianCheckerAR extends AbstractMendelianChecker
MendelianCheckerARHom
and MendelianCheckerARCompoundHet
. The
GenotypeCalls
objects passing either filter will be returned.Constructor and Description |
---|
MendelianCheckerAR(MendelianInheritanceChecker parent) |
Modifier and Type | Method and Description |
---|---|
com.google.common.collect.ImmutableList<GenotypeCalls> |
filterCompatibleRecords(Collection<GenotypeCalls> calls)
Filter list of
GenotypeCalls for fitting to mode |
public MendelianCheckerAR(MendelianInheritanceChecker parent)
public com.google.common.collect.ImmutableList<GenotypeCalls> filterCompatibleRecords(Collection<GenotypeCalls> calls) throws IncompatiblePedigreeException
AbstractMendelianChecker
GenotypeCalls
for fitting to modefilterCompatibleRecords
in class AbstractMendelianChecker
calls
- The list of calls to check for compatibilityImmutableList
of GenotypeCalls
objects, subset of calls
IncompatiblePedigreeException
- if calls
is incompatible with the pedigreeCopyright © 2016. All rights reserved.