public class MendelianCheckerARCompoundHet extends AbstractMendelianChecker
Collection
of GenotypeCalls
for compatibility with a Pedigree
and
autosomal recessive compound het mode of inheritance.
Constructor and Description |
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MendelianCheckerARCompoundHet(MendelianInheritanceChecker parent) |
Modifier and Type | Method and Description |
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com.google.common.collect.ImmutableList<GenotypeCalls> |
filterCompatibleRecords(Collection<GenotypeCalls> calls)
Filter list of
GenotypeCalls for fitting to mode |
public MendelianCheckerARCompoundHet(MendelianInheritanceChecker parent)
public com.google.common.collect.ImmutableList<GenotypeCalls> filterCompatibleRecords(Collection<GenotypeCalls> calls) throws IncompatiblePedigreeException
AbstractMendelianChecker
GenotypeCalls
for fitting to modefilterCompatibleRecords
in class AbstractMendelianChecker
calls
- The list of calls to check for compatibilityImmutableList
of GenotypeCalls
objects, subset of calls
IncompatiblePedigreeException
- if calls
is incompatible with the pedigreeCopyright © 2016. All rights reserved.