Serialized Form (ImageJ 1.52p API)

Package ij
- Class ij.ImageJ extends Frame implements Serializable
  - Serialized Fields
    - toolbar
```
Toolbar toolbar
```
    - statusBar
```
Panel statusBar
```
    - progressBar
```
ProgressBar progressBar
```
    - statusLine
```
JLabel statusLine
```
    - firstTime
```
boolean firstTime
```
    - applet
```
Applet applet
```
    - classes
```
Vector<E> classes
```
    - exitWhenQuitting
```
boolean exitWhenQuitting
```
    - quitting
```
boolean quitting
```
    - quitMacro
```
boolean quitMacro
```
    - keyPressedTime
```
long keyPressedTime
```
    - actionPerformedTime
```
long actionPerformedTime
```
    - lastKeyCommand
```
String lastKeyCommand
```
    - embedded
```
boolean embedded
```
    - windowClosed
```
boolean windowClosed
```
    - hotkey
```
boolean hotkey
```
- Class ij.ImageJApplet extends Applet implements Serializable
Package ij.gui
- Class ij.gui.Arrow extends Line implements Serializable
  - Serialized Fields
    - style
```
int style
```
    - headSize
```
double headSize
```
    - doubleHeaded
```
boolean doubleHeaded
```
    - outline
```
boolean outline
```
    - points
```
float[] points
```
    - path
```
GeneralPath path
```
    - headShaftRatio
```
double headShaftRatio
```
- Class ij.gui.EllipseRoi extends PolygonRoi implements Serializable
  - Serialized Fields
    - xstart
```
double xstart
```
    - ystart
```
double ystart
```
    - aspectRatio
```
double aspectRatio
```
    - handle
```
int[] handle
```
- Class ij.gui.FreehandRoi extends PolygonRoi implements Serializable
- Class ij.gui.GenericDialog extends Dialog implements Serializable
  - Serialized Fields
    - numberField
```
Vector<E> numberField
```
    - stringField
```
Vector<E> stringField
```
    - checkbox
```
Vector<E> checkbox
```
    - choice
```
Vector<E> choice
```
    - slider
```
Vector<E> slider
```
    - radioButtonGroups
```
Vector<E> radioButtonGroups
```
    - textArea1
```
TextArea textArea1
```
    - textArea2
```
TextArea textArea2
```
    - defaultValues
```
Vector<E> defaultValues
```
    - defaultText
```
Vector<E> defaultText
```
    - defaultStrings
```
Vector<E> defaultStrings
```
    - defaultChoiceIndexes
```
Vector<E> defaultChoiceIndexes
```
    - theLabel
```
Component theLabel
```
    - cancel
```
Button cancel
```
    - okay
```
Button okay
```
    - no
```
Button no
```
    - help
```
Button help
```
    - okLabel
```
String okLabel
```
    - cancelLabel
```
String cancelLabel
```
    - helpLabel
```
String helpLabel
```
    - wasCanceled
```
boolean wasCanceled
```
    - wasOKed
```
boolean wasOKed
```
    - nfIndex
```
int nfIndex
```
    - sfIndex
```
int sfIndex
```
    - cbIndex
```
int cbIndex
```
    - choiceIndex
```
int choiceIndex
```
    - textAreaIndex
```
int textAreaIndex
```
    - radioButtonIndex
```
int radioButtonIndex
```
    - c
```
GridBagConstraints c
```
    - firstNumericField
```
boolean firstNumericField
```
    - firstSlider
```
boolean firstSlider
```
    - invalidNumber
```
boolean invalidNumber
```
    - errorMessage
```
String errorMessage
```
    - labels
```
Hashtable<K,V> labels
```
    - macro
```
boolean macro
```
    - macroOptions
```
String macroOptions
```
    - addToSameRow
```
boolean addToSameRow
```
    - addToSameRowCalled
```
boolean addToSameRowCalled
```
    - topInset
```
int topInset
```
    - leftInset
```
int leftInset
```
    - bottomInset
```
int bottomInset
```
    - customInsets
```
boolean customInsets
```
    - sliderIndexes
```
Vector<E> sliderIndexes
```
    - sliderScales
```
Vector<E> sliderScales
```
    - sliderDigits
```
Vector<E> sliderDigits
```
    - previewCheckbox
```
Checkbox previewCheckbox
```
    - dialogListeners
```
Vector<E> dialogListeners
```
    - pfr
```
PlugInFilterRunner pfr
```
    - previewLabel
```
String previewLabel
```
    - recorderOn
```
boolean recorderOn
```
    - yesNoCancel
```
boolean yesNoCancel
```
    - echoChar
```
char echoChar
```
    - hideCancelButton
```
boolean hideCancelButton
```
    - centerDialog
```
boolean centerDialog
```
    - helpURL
```
String helpURL
```
    - yesLabel
```
String yesLabel
```
    - noLabel
```
String noLabel
```
    - smartRecording
```
boolean smartRecording
```
    - imagePanels
```
Vector<E> imagePanels
```
    - firstPaint
```
boolean firstPaint
```
    - fontSizeSet
```
boolean fontSizeSet
```
- Class ij.gui.HistogramWindow extends ImageWindow implements Serializable
  - Serialized Fields
    - stats
```
ImageStatistics stats
```
    - histogram
```
long[] histogram
```
    - lut
```
LookUpTable lut
```
    - frame
```
Rectangle frame
```
    - list
```
Button list
```
    - save
```
Button save
```
    - copy
```
Button copy
```
    - log
```
Button log
```
    - live
```
Button live
```
    - rgb
```
Button rgb
```
    - value
```
Label value
```
    - count
```
Label count
```
    - decimalPlaces
```
int decimalPlaces
```
    - digits
```
int digits
```
    - newMaxCount
```
long newMaxCount
```
    - plotScale
```
int plotScale
```
    - logScale
```
boolean logScale
```
    - cal
```
Calibration cal
```
    - yMax
```
int yMax
```
    - srcImageID
```
int srcImageID
```
    - srcImp
```
ImagePlus srcImp
```
    - bgThread
```
Thread bgThread
```
    - doUpdate
```
boolean doUpdate
```
    - rgbMode
```
int rgbMode
```
    - blankLabel
```
String blankLabel
```
    - stackHistogram
```
boolean stackHistogram
```
- Class ij.gui.HTMLDialog extends JDialog implements Serializable
  - Serialized Fields
    - escapePressed
```
boolean escapePressed
```
    - editorPane
```
JEditorPane editorPane
```
    - modal
```
boolean modal
```
- Class ij.gui.ImageCanvas extends Canvas implements Serializable
  - Serialized Fields
    - imp
```
ImagePlus imp
```
    - imageUpdated
```
boolean imageUpdated
```
    - srcRect
```
Rectangle srcRect
```
    - imageWidth
```
int imageWidth
```
    - imageHeight
```
int imageHeight
```
    - xMouse
```
int xMouse
```
    - yMouse
```
int yMouse
```
    - showCursorStatus
```
boolean showCursorStatus
```
    - sx2
```
int sx2
```
    - sy2
```
int sy2
```
    - disablePopupMenu
```
boolean disablePopupMenu
```
    - font
```
Font font
```
    - labelRects
```
Rectangle[] labelRects
```
    - maxBoundsReset
```
boolean maxBoundsReset
```
    - overlay
```
Overlay overlay
```
    - showAllOverlay
```
Overlay showAllOverlay
```
    - defaultColor
```
Color defaultColor
```
    - resetMaxBoundsCount
```
int resetMaxBoundsCount
```
    - currentRoi
```
Roi currentRoi
```
    - mousePressedX
```
int mousePressedX
```
    - mousePressedY
```
int mousePressedY
```
    - mousePressedTime
```
long mousePressedTime
```
    - overOverlayLabel
```
boolean overOverlayLabel
```
    - lastZoomSX
```
int lastZoomSX
```
      Screen coordinates where the last zoom operation was done (initialized to impossible value)
    - lastZoomSY
```
int lastZoomSY
```
    - zoomTargetOX
```
int zoomTargetOX
```
      Image (=offscreen) coordinates where the cursor was moved to for zooming
    - zoomTargetOY
```
int zoomTargetOY
```
    - ij
```
ImageJ ij
```
    - magnification
```
double magnification
```
    - dstWidth
```
int dstWidth
```
    - dstHeight
```
int dstHeight
```
    - xMouseStart
```
int xMouseStart
```
    - yMouseStart
```
int yMouseStart
```
    - xSrcStart
```
int xSrcStart
```
    - ySrcStart
```
int ySrcStart
```
    - flags
```
int flags
```
    - offScreenImage
```
Image offScreenImage
```
    - offScreenWidth
```
int offScreenWidth
```
    - offScreenHeight
```
int offScreenHeight
```
    - mouseExited
```
boolean mouseExited
```
    - customRoi
```
boolean customRoi
```
    - drawNames
```
boolean drawNames
```
    - paintPending
```
AtomicBoolean paintPending
```
    - scaleToFit
```
boolean scaleToFit
```
    - painted
```
boolean painted
```
    - hideZoomIndicator
```
boolean hideZoomIndicator
```
    - flattening
```
boolean flattening
```
    - firstFrame
```
long firstFrame
```
    - frames
```
int frames
```
    - fps
```
int fps
```
- Class ij.gui.ImagePanel extends Panel implements Serializable
  - Serialized Fields
    - img
```
ImagePlus img
```
    - width
```
int width
```
    - height
```
int height
```
- Class ij.gui.ImageRoi extends Roi implements Serializable
  - Serialized Fields
    - img
```
Image img
```
    - composite
```
Composite composite
```
    - opacity
```
double opacity
```
    - angle
```
double angle
```
    - zeroTransparent
```
boolean zeroTransparent
```
    - ip
```
ImageProcessor ip
```
- Class ij.gui.ImageWindow extends Frame implements Serializable
  - Serialized Fields
    - imp
```
ImagePlus imp
```
    - ij
```
ImageJ ij
```
    - ic
```
ImageCanvas ic
```
    - initialMagnification
```
double initialMagnification
```
    - newWidth
```
int newWidth
```
    - newHeight
```
int newHeight
```
    - closed
```
boolean closed
```
    - newCanvas
```
boolean newCanvas
```
    - unzoomWhenMinimizing
```
boolean unzoomWhenMinimizing
```
    - maxWindowBounds
```
Rectangle maxWindowBounds
```
    - maxBounds
```
Rectangle maxBounds
```
    - setMaxBoundsTime
```
long setMaxBoundsTime
```
    - firstSmallWindow
```
boolean firstSmallWindow
```
    - sliderHeight
```
int sliderHeight
```
    - SCALE
```
double SCALE
```
    - TEXT_GAP
```
int TEXT_GAP
```
    - textGap
```
int textGap
```
    - running
```
boolean running
```
      This variable is set false if the user presses the escape key or closes the window.
    - running2
```
boolean running2
```
      This variable is set false if the user clicks in this window, presses the escape key, or closes the window.
- Class ij.gui.Line extends Roi implements Serializable
  - Serialized Fields
    - x1
```
int x1
```
    - y1
```
int y1
```
    - x2
```
int x2
```
    - y2
```
int y2
```
    - x1d
```
double x1d
```
    - y1d
```
double y1d
```
    - x2d
```
double x2d
```
    - y2d
```
double y2d
```
    - x1R
```
double x1R
```
    - y1R
```
double y1R
```
    - x2R
```
double x2R
```
    - y2R
```
double y2R
```
    - xHandleOffset
```
double xHandleOffset
```
    - yHandleOffset
```
double yHandleOffset
```
    - startxd
```
double startxd
```
    - startyd
```
double startyd
```
    - drawOffset
```
boolean drawOffset
```
    - dragged
```
boolean dragged
```
    - mouseUpCount
```
int mouseUpCount
```
- Class ij.gui.MessageDialog extends Dialog implements Serializable
  - Serialized Fields
    - button
```
Button button
```
    - label
```
MultiLineLabel label
```
    - escapePressed
```
boolean escapePressed
```
- Class ij.gui.MultiLineLabel extends Canvas implements Serializable
  - Serialized Fields
    - lines
```
String[] lines
```
    - num_lines
```
int num_lines
```
    - margin_width
```
int margin_width
```
    - margin_height
```
int margin_height
```
    - line_height
```
int line_height
```
    - line_ascent
```
int line_ascent
```
    - line_widths
```
int[] line_widths
```
    - min_width
```
int min_width
```
    - max_width
```
int max_width
```
- Class ij.gui.NonBlockingGenericDialog extends GenericDialog implements Serializable
- Class ij.gui.OvalRoi extends Roi implements Serializable
- Class ij.gui.PlotCanvas extends ImageCanvas implements Serializable
  - Serialized Fields
    - plot
```
Plot plot
```
      The plot displayed
    - xScrolled
```
int xScrolled
```
    - yScrolled
```
int yScrolled
```
    - oldWidth
```
int oldWidth
```
    - oldHeight
```
int oldHeight
```
    - rangeArrowIndexWhenPressed
```
int rangeArrowIndexWhenPressed
```
- Class ij.gui.PlotWindow extends ImageWindow implements Serializable
  - Serialized Fields
    - wasActivated
```
boolean wasActivated
```
    - list
```
Button list
```
    - data
```
Button data
```
    - more
```
Button more
```
    - live
```
Button live
```
    - dataPopupMenu
```
PopupMenu dataPopupMenu
```
    - morePopupMenu
```
PopupMenu morePopupMenu
```
    - menuItems
```
MenuItem[] menuItems
```
    - coordinates
```
Label coordinates
```
    - defaultDigits
```
int defaultDigits
```
    - markSize
```
int markSize
```
    - plot
```
Plot plot
```
    - blankLabel
```
String blankLabel
```
    - plotMaker
```
PlotMaker plotMaker
```
    - srcImp
```
ImagePlus srcImp
```
    - bgThread
```
Thread bgThread
```
    - doUpdate
```
boolean doUpdate
```
    - rangeArrowRois
```
Roi[] rangeArrowRois
```
    - rangeArrowsVisible
```
boolean rangeArrowsVisible
```
    - activeRangeArrow
```
int activeRangeArrow
```
- Class ij.gui.PointRoi extends PolygonRoi implements Serializable
  - Serialized Fields
    - showLabels
```
boolean showLabels
```
    - type
```
int type
```
    - size
```
int size
```
    - counter
```
int counter
```
    - nCounters
```
int nCounters
```
    - counters
```
short[] counters
```
    - positions
```
int[] positions
```
    - counts
```
int[] counts
```
    - rt
```
ResultsTable rt
```
    - lastPointTime
```
long lastPointTime
```
    - counterInfo
```
int[] counterInfo
```
    - promptBeforeDeleting
```
boolean promptBeforeDeleting
```
    - promptBeforeDeletingCalled
```
boolean promptBeforeDeletingCalled
```
    - nMarkers
```
int nMarkers
```
    - addToOverlay
```
boolean addToOverlay
```
- Class ij.gui.PolygonRoi extends Roi implements Serializable
  - Serialized Fields
    - maxPoints
```
int maxPoints
```
    - xp
```
int[] xp
```
    - yp
```
int[] yp
```
    - xpf
```
float[] xpf
```
    - ypf
```
float[] ypf
```
    - xp2
```
int[] xp2
```
    - yp2
```
int[] yp2
```
    - nPoints
```
int nPoints
```
    - xSpline
```
float[] xSpline
```
    - ySpline
```
float[] ySpline
```
    - splinePoints
```
int splinePoints
```
    - clip
```
Rectangle clip
```
    - angle1
```
double angle1
```
    - degrees
```
double degrees
```
    - xClipMin
```
int xClipMin
```
    - yClipMin
```
int yClipMin
```
    - xClipMax
```
int xClipMax
```
    - yClipMax
```
int yClipMax
```
    - userCreated
```
boolean userCreated
```
    - subPixel
```
boolean subPixel
```
    - drawOffset
```
boolean drawOffset
```
    - mouseUpTime
```
long mouseUpTime
```
- Class ij.gui.ProgressBar extends Canvas implements Serializable
  - Serialized Fields
    - canvasWidth
```
int canvasWidth
```
    - canvasHeight
```
int canvasHeight
```
    - x
```
int x
```
    - y
```
int y
```
    - width
```
int width
```
    - height
```
int height
```
    - lastTime
```
long lastTime
```
    - showBar
```
boolean showBar
```
    - batchMode
```
boolean batchMode
```
    - barColor
```
Color barColor
```
    - fillColor
```
Color fillColor
```
    - backgroundColor
```
Color backgroundColor
```
    - frameBrighter
```
Color frameBrighter
```
    - frameDarker
```
Color frameDarker
```
    - dualDisplay
```
boolean dualDisplay
```
    - slowX
```
double slowX
```
    - fastX
```
double fastX
```
- Class ij.gui.Roi extends Object implements Serializable
  - Serialized Fields
    - startX
```
int startX
```
    - startY
```
int startY
```
    - x
```
int x
```
    - y
```
int y
```
    - width
```
int width
```
    - height
```
int height
```
    - startXD
```
double startXD
```
    - startYD
```
double startYD
```
    - bounds
```
Rectangle2D.Double bounds
```
    - activeHandle
```
int activeHandle
```
    - state
```
int state
```
    - modState
```
int modState
```
    - cornerDiameter
```
int cornerDiameter
```
    - previousSX
```
int previousSX
```
    - previousSY
```
int previousSY
```
    - type
```
int type
```
    - xMax
```
int xMax
```
    - yMax
```
int yMax
```
    - imp
```
ImagePlus imp
```
    - imageID
```
int imageID
```
    - ic
```
ImageCanvas ic
```
    - oldX
```
int oldX
```
    - oldY
```
int oldY
```
    - oldWidth
```
int oldWidth
```
    - oldHeight
```
int oldHeight
```
    - clipX
```
int clipX
```
    - clipY
```
int clipY
```
    - clipWidth
```
int clipWidth
```
    - clipHeight
```
int clipHeight
```
    - clipboard
```
ImagePlus clipboard
```
    - constrain
```
boolean constrain
```
    - center
```
boolean center
```
    - aspect
```
boolean aspect
```
    - updateFullWindow
```
boolean updateFullWindow
```
    - mag
```
double mag
```
    - asp_bk
```
double asp_bk
```
    - cachedMask
```
ImageProcessor cachedMask
```
    - handleColor
```
Color handleColor
```
    - strokeColor
```
Color strokeColor
```
    - instanceColor
```
Color instanceColor
```
    - fillColor
```
Color fillColor
```
    - stroke
```
BasicStroke stroke
```
    - nonScalable
```
boolean nonScalable
```
    - overlay
```
boolean overlay
```
    - wideLine
```
boolean wideLine
```
    - ignoreClipRect
```
boolean ignoreClipRect
```
    - flattenScale
```
double flattenScale
```
    - name
```
String name
```
    - position
```
int position
```
    - channel
```
int channel
```
    - slice
```
int slice
```
    - frame
```
int frame
```
    - hyperstackPosition
```
boolean hyperstackPosition
```
    - prototypeOverlay
```
Overlay prototypeOverlay
```
    - subPixel
```
boolean subPixel
```
    - activeOverlayRoi
```
boolean activeOverlayRoi
```
    - props
```
Properties props
```
    - isCursor
```
boolean isCursor
```
    - xcenter
```
double xcenter
```
    - ycenter
```
double ycenter
```
    - listenersNotified
```
boolean listenersNotified
```
    - antiAlias
```
boolean antiAlias
```
- Class ij.gui.RotatedRectRoi extends PolygonRoi implements Serializable
  - Serialized Fields
    - xstart
```
double xstart
```
    - ystart
```
double ystart
```
    - rectWidth
```
double rectWidth
```
- Class ij.gui.SaveChangesDialog extends Dialog implements Serializable
  - Serialized Fields
    - dontSave
```
Button dontSave
```
    - cancel
```
Button cancel
```
    - save
```
Button save
```
    - cancelPressed
```
boolean cancelPressed
```
    - savePressed
```
boolean savePressed
```
- Class ij.gui.ScrollbarWithLabel extends Panel implements Serializable
  - Serialized Fields
    - bar
```
Scrollbar bar
```
    - icon
```
ij.gui.ScrollbarWithLabel.Icon icon
```
    - stackWindow
```
StackWindow stackWindow
```
- Class ij.gui.ShapeRoi extends Roi implements Serializable
  - Serialized Fields
    - shape
```
Shape shape
```
      The java.awt.Shape encapsulated by this object.
    - maxerror
```
double maxerror
```
      The instance value of the maximum tolerance (MAXERROR) allowed in calculating the length of the curve segments of this ROI's shape.
    - flatness
```
double flatness
```
      The instance value of the coefficient (FLATNESS) used to obtain a flattened version of this ROI's shape.
    - maxPoly
```
int maxPoly
```
      The instance value of MAXPOLY.
    - flatten
```
boolean flatten
```
      If true then methods that manipulate this ROI's shape will work on a flattened version of the shape.
    - forceTrace
```
boolean forceTrace
```
      Flag which specifies how Roi objects will be constructed from closed (sub)paths having more than MAXPOLY and composed exclusively of line segments. If true then (sub)path will be parsed into a Roi.TRACED_ROI; else, into a Roi.FREEROI.
    - forceAngle
```
boolean forceAngle
```
      Flag which specifies if Roi objects constructed from open (sub)paths composed of only two line segments will be of type Roi.ANGLE. If true then (sub)path will be parsed into a Roi.ANGLE; else, into a Roi.POLYLINE.
    - savedRois
```
Vector<E> savedRois
```
- Class ij.gui.StackWindow extends ImageWindow implements Serializable
  - Serialized Fields
    - sliceSelector
```
Scrollbar sliceSelector
```
    - cSelector
```
ScrollbarWithLabel cSelector
```
    - zSelector
```
ScrollbarWithLabel zSelector
```
    - tSelector
```
ScrollbarWithLabel tSelector
```
    - thread
```
Thread thread
```
    - done
```
boolean done
```
    - slice
```
int slice
```
    - animationSelector
```
ScrollbarWithLabel animationSelector
```
    - hyperStack
```
boolean hyperStack
```
    - nChannels
```
int nChannels
```
    - nSlices
```
int nSlices
```
    - nFrames
```
int nFrames
```
    - c
```
int c
```
    - z
```
int z
```
    - t
```
int t
```
- Class ij.gui.TextRoi extends Roi implements Serializable
  - Serialized Fields
    - theText
```
String[] theText
```
    - instanceFont
```
Font instanceFont
```
    - justification
```
int justification
```
    - previousMag
```
double previousMag
```
    - firstChar
```
boolean firstChar
```
    - firstMouseUp
```
boolean firstMouseUp
```
    - cline
```
int cline
```
    - drawStringMode
```
boolean drawStringMode
```
    - angle
```
double angle
```
    - previousRoi
```
Roi previousRoi
```
- Class ij.gui.Toolbar extends Canvas implements Serializable
  - Serialized Fields
    - ps
```
Dimension ps
```
    - down
```
boolean[] down
```
    - previous
```
int previous
```
    - x
```
int x
```
    - y
```
int y
```
    - xOffset
```
int xOffset
```
    - yOffset
```
int yOffset
```
    - mouseDownTime
```
long mouseDownTime
```
    - g
```
Graphics g
```
    - mpPrevious
```
int mpPrevious
```
    - names
```
String[] names
```
    - icons
```
String[] icons
```
    - tools
```
PlugInTool[] tools
```
    - menus
```
PopupMenu[] menus
```
    - nExtraTools
```
int nExtraTools
```
    - macroInstaller
```
MacroInstaller macroInstaller
```
    - addingSingleTool
```
boolean addingSingleTool
```
    - installingStartupTool
```
boolean installingStartupTool
```
    - doNotSavePrefs
```
boolean doNotSavePrefs
```
    - pc
```
int pc
```
    - icon
```
String icon
```
    - startupTime
```
int startupTime
```
    - rectPopup
```
PopupMenu rectPopup
```
    - ovalPopup
```
PopupMenu ovalPopup
```
    - pointPopup
```
PopupMenu pointPopup
```
    - linePopup
```
PopupMenu linePopup
```
    - switchPopup
```
PopupMenu switchPopup
```
    - rectItem
```
CheckboxMenuItem rectItem
```
    - roundRectItem
```
CheckboxMenuItem roundRectItem
```
    - rotatedRectItem
```
CheckboxMenuItem rotatedRectItem
```
    - ovalItem
```
CheckboxMenuItem ovalItem
```
    - ellipseItem
```
CheckboxMenuItem ellipseItem
```
    - brushItem
```
CheckboxMenuItem brushItem
```
    - pointItem
```
CheckboxMenuItem pointItem
```
    - multiPointItem
```
CheckboxMenuItem multiPointItem
```
    - straightLineItem
```
CheckboxMenuItem straightLineItem
```
    - polyLineItem
```
CheckboxMenuItem polyLineItem
```
    - freeLineItem
```
CheckboxMenuItem freeLineItem
```
    - arrowItem
```
CheckboxMenuItem arrowItem
```
    - currentSet
```
String currentSet
```
    - lineType
```
int lineType
```
    - gray
```
Color gray
```
    - brighter
```
Color brighter
```
    - darker
```
Color darker
```
    - evenDarker
```
Color evenDarker
```
    - triangleColor
```
Color triangleColor
```
    - toolColor
```
Color toolColor
```
- Class ij.gui.TrimmedButton extends Button implements Serializable
  - Serialized Fields
    - trim
```
int trim
```
- Class ij.gui.WaitForUserDialog extends Dialog implements Serializable
  - Serialized Fields
    - button
```
Button button
```
    - label
```
MultiLineLabel label
```
    - escPressed
```
boolean escPressed
```
- Class ij.gui.YesNoCancelDialog extends Dialog implements Serializable
  - Serialized Fields
    - yesB
```
Button yesB
```
    - noB
```
Button noB
```
    - cancelB
```
Button cancelB
```
    - cancelPressed
```
boolean cancelPressed
```
    - yesPressed
```
boolean yesPressed
```
    - firstPaint
```
boolean firstPaint
```

Package ij.plugin.frame

Class ij.plugin.frame.Channels extends PlugInDialog implements Serializable
- Serialized Fields
  - choice
```
Choice choice
```
  - checkbox
```
Checkbox[] checkbox
```
  - moreButton
```
Button moreButton
```
  - id
```
int id
```
  - pm
```
PopupMenu pm
```
Class ij.plugin.frame.ColorPicker extends PlugInDialog implements Serializable

Class ij.plugin.frame.ColorThresholder extends PlugInFrame implements Serializable

Serialized Fields

flag
```
boolean flag
```
colorSpace
```
int colorSpace
```
thread
```
Thread thread
```

plot

ij.plugin.frame.ColorThresholder.BandPlot plot

splot

ij.plugin.frame.ColorThresholder.BandPlot splot

bplot

ij.plugin.frame.ColorThresholder.BandPlot bplot

sliderRange
```
int sliderRange
```
panel
```
Panel panel
```
panelt
```
Panel panelt
```
originalB
```
Button originalB
```
filteredB
```
Button filteredB
```
stackB
```
Button stackB
```
helpB
```
Button helpB
```
sampleB
```
Button sampleB
```
resetallB
```
Button resetallB
```
newB
```
Button newB
```
macroB
```
Button macroB
```
selectB
```
Button selectB
```
bandPassH
```
Checkbox bandPassH
```
bandPassS
```
Checkbox bandPassS
```
bandPassB
```
Checkbox bandPassB
```
darkBackground
```
Checkbox darkBackground
```
colourMode
```
CheckboxGroup colourMode
```
colorSpaceChoice
```
Choice colorSpaceChoice
```
methodChoice
```
Choice methodChoice
```
modeChoice
```
Choice modeChoice
```
previousImageID
```
int previousImageID
```
previousSlice
```
int previousSlice
```
ij
```
ImageJ ij
```
minHue
```
int minHue
```
minSat
```
int minSat
```
minBri
```
int minBri
```
maxHue
```
int maxHue
```
maxSat
```
int maxSat
```
maxBri
```
int maxBri
```
minSlider
```
Scrollbar minSlider
```
maxSlider
```
Scrollbar maxSlider
```
minSlider2
```
Scrollbar minSlider2
```
maxSlider2
```
Scrollbar maxSlider2
```
minSlider3
```
Scrollbar minSlider3
```
maxSlider3
```
Scrollbar maxSlider3
```
label1
```
Label label1
```
label2
```
Label label2
```
label3
```
Label label3
```
label4
```
Label label4
```
label5
```
Label label5
```
label6
```
Label label6
```
labelh
```
Label labelh
```
labels
```
Label labels
```
labelb
```
Label labelb
```
labelf
```
Label labelf
```
done
```
boolean done
```
hSource
```
byte[] hSource
```
sSource
```
byte[] sSource
```
bSource
```
byte[] bSource
```
applyingStack
```
boolean applyingStack
```
numSlices
```
int numSlices
```
stack
```
ImageStack stack
```
width
```
int width
```
height
```
int height
```
numPixels
```
int numPixels
```

Class ij.plugin.frame.ContrastAdjuster extends PlugInDialog implements Serializable

Serialized Fields

plot
```
ij.plugin.frame.ContrastPlot plot
```
thread
```
Thread thread
```
minSliderValue
```
int minSliderValue
```
maxSliderValue
```
int maxSliderValue
```
brightnessValue
```
int brightnessValue
```
contrastValue
```
int contrastValue
```
sliderRange
```
int sliderRange
```
doAutoAdjust
```
boolean doAutoAdjust
```
doReset
```
boolean doReset
```
doSet
```
boolean doSet
```
doApplyLut
```
boolean doApplyLut
```
panel
```
Panel panel
```
tPanel
```
Panel tPanel
```
autoB
```
Button autoB
```
resetB
```
Button resetB
```
setB
```
Button setB
```
applyB
```
Button applyB
```
previousImageID
```
int previousImageID
```
previousType
```
int previousType
```
previousSlice
```
int previousSlice
```
ij
```
ImageJ ij
```
min
```
double min
```
max
```
double max
```
previousMin
```
double previousMin
```
previousMax
```
double previousMax
```
defaultMin
```
double defaultMin
```
defaultMax
```
double defaultMax
```
contrast
```
int contrast
```
brightness
```
int brightness
```
RGBImage
```
boolean RGBImage
```
minSlider
```
Scrollbar minSlider
```
maxSlider
```
Scrollbar maxSlider
```
contrastSlider
```
Scrollbar contrastSlider
```
brightnessSlider
```
Scrollbar brightnessSlider
```
minLabel
```
Label minLabel
```
maxLabel
```
Label maxLabel
```
windowLabel
```
Label windowLabel
```
levelLabel
```
Label levelLabel
```
done
```
boolean done
```
autoThreshold
```
int autoThreshold
```
gridbag
```
GridBagLayout gridbag
```
c
```
GridBagConstraints c
```
y
```
int y
```
windowLevel
```
boolean windowLevel
```
balance
```
boolean balance
```
monoFont
```
Font monoFont
```
sanFont
```
Font sanFont
```
channels
```
int channels
```
choice
```
Choice choice
```
blankMinLabel
```
String blankMinLabel
```
blankMaxLabel
```
String blankMaxLabel
```
scale
```
double scale
```

Class ij.plugin.frame.Editor extends PlugInFrame implements Serializable

Serialized Fields

ta
```
TextArea ta
```
path
```
String path
```
changes
```
boolean changes
```
fileMenu
```
Menu fileMenu
```
editMenu
```
Menu editMenu
```
p
```
Properties p
```
macroStarts
```
int[] macroStarts
```
macroNames
```
String[] macroNames
```
mb
```
MenuBar mb
```
macrosMenu
```
Menu macrosMenu
```
nMacros
```
int nMacros
```
pgm
```
Program pgm
```
eventCount
```
int eventCount
```
shortcutsInUse
```
String shortcutsInUse
```
inUseCount
```
int inUseCount
```
installer
```
MacroInstaller installer
```
dontShowWindow
```
boolean dontShowWindow
```
sizes
```
int[] sizes
```
fontSize
```
int fontSize
```
monospaced
```
CheckboxMenuItem monospaced
```
isMacroWindow
```
boolean isMacroWindow
```
debugStart
```
int debugStart
```
debugEnd
```
int debugEnd
```
step
```
boolean step
```
previousLine
```
int previousLine
```
runToLine
```
int runToLine
```
downloadUrl
```
String downloadUrl
```
downloading
```
boolean downloading
```
functionFinder
```
FunctionFinder functionFinder
```
undoBuffer
```
ArrayList<E> undoBuffer
```
performingUndo
```
boolean performingUndo
```
checkForCurlyQuotes
```
boolean checkForCurlyQuotes
```
insertSpacesItem
```
CheckboxMenuItem insertSpacesItem
```
interactiveMode
```
boolean interactiveMode
```
interpreter
```
Interpreter interpreter
```
evaluator
```
JavaScriptEvaluator evaluator
```
messageCount
```
int messageCount
```

Class ij.plugin.frame.Fitter extends PlugInFrame implements Serializable

Serialized Fields

fit
```
Choice fit
```
doIt
```
Button doIt
```
open
```
Button open
```
apply
```
Button apply
```
settings
```
Checkbox settings
```
fitTypeStr
```
String fitTypeStr
```
textArea
```
TextArea textArea
```
dx
```
double[] dx
```
dy
```
double[] dy
```
x
```
double[] x
```
y
```
double[] y
```

Class ij.plugin.frame.LineWidthAdjuster extends PlugInFrame implements Serializable
- Serialized Fields
  - sliderRange
```
int sliderRange
```
  - slider
```
Scrollbar slider
```
  - value
```
int value
```
  - setText
```
boolean setText
```
  - thread
```
Thread thread
```
  - done
```
boolean done
```
  - tf
```
TextField tf
```
  - checkbox
```
Checkbox checkbox
```
Class ij.plugin.frame.MemoryMonitor extends PlugInFrame implements Serializable
- Serialized Fields
  - image
```
Image image
```
  - g
```
Graphics2D g
```
  - frames
```
int frames
```
  - mem
```
double[] mem
```
  - index
```
int index
```
  - value
```
long value
```
  - defaultMax
```
double defaultMax
```
  - max
```
double max
```
  - maxMemory
```
long maxMemory
```
  - done
```
boolean done
```
Class ij.plugin.frame.PasteController extends PlugInFrame implements Serializable
- Serialized Fields
  - panel
```
Panel panel
```
  - pasteMode
```
Choice pasteMode
```
Class ij.plugin.frame.PlugInDialog extends Dialog implements Serializable
- Serialized Fields
  - title
```
String title
```
Class ij.plugin.frame.PlugInFrame extends Frame implements Serializable
- Serialized Fields
  - title
```
String title
```
Class ij.plugin.frame.Recorder extends PlugInFrame implements Serializable
- Serialized Fields
  - mode
```
Choice mode
```
  - makeMacro
```
Button makeMacro
```
  - help
```
Button help
```
  - fileName
```
TextField fileName
```
  - fitTypeStr
```
String fitTypeStr
```

Class ij.plugin.frame.RoiManager extends PlugInFrame implements Serializable

Serialized Fields

panel
```
Panel panel
```
list
```
JList<E> list
```
listModel
```
DefaultListModel<E> listModel
```
rois
```
ArrayList<E> rois
```
canceled
```
boolean canceled
```
macro
```
boolean macro
```
ignoreInterrupts
```
boolean ignoreInterrupts
```
pm
```
PopupMenu pm
```
moreButton
```
Button moreButton
```
colorButton
```
Button colorButton
```
showAllCheckbox
```
Checkbox showAllCheckbox
```
labelsCheckbox
```
Checkbox labelsCheckbox
```
overlayTemplate
```
Overlay overlayTemplate
```
prevID
```
int prevID
```
noUpdateMode
```
boolean noUpdateMode
```
defaultLineWidth
```
int defaultLineWidth
```
defaultColor
```
Color defaultColor
```
firstTime
```
boolean firstTime
```
selectedIndexes
```
int[] selectedIndexes
```
appendResults
```
boolean appendResults
```
imageID
```
int imageID
```
allowRecording
```
boolean allowRecording
```
recordShowAll
```
boolean recordShowAll
```
allowDuplicates
```
boolean allowDuplicates
```
translateX
```
double translateX
```
translateY
```
double translateY
```

Class ij.plugin.frame.SyncWindows extends PlugInFrame implements Serializable
- Serialized Fields
  - vwins
```
Vector<E> vwins
```
    Indices of synchronized image windows are maintained in this Vector.
  - oldX
```
int oldX
```
  - oldY
```
int oldY
```
  - x
```
int x
```
  - y
```
int y
```
  - wList
```
List wList
```
    List of currently displayed windows retrieved from ImageJ window manager.
  - panel
```
Panel panel
```
    Panel for GUI
  - cCursor
```
Checkbox cCursor
```
    Checkboxes for user control.
  - cSlice
```
Checkbox cSlice
```
    Checkboxes for user control.
  - cChannel
```
Checkbox cChannel
```
    Checkboxes for user control.
  - cFrame
```
Checkbox cFrame
```
    Checkboxes for user control.
  - cCoords
```
Checkbox cCoords
```
    Checkboxes for user control.
  - cScaling
```
Checkbox cScaling
```
    Checkboxes for user control.
  - bSyncAll
```
Button bSyncAll
```
    Buttons for user control.
  - bUnsyncAll
```
Button bUnsyncAll
```
    Buttons for user control.
  - vListMap
```
Vector<E> vListMap
```
    Hashtable to map list ids to image window ids.
  - ijInstance
```
ImageJ ijInstance
```
    reference to current instance of ImageJ (to avoid repeated IJ.getInstance() s)
  - currentMag
```
double currentMag
```
  - currentSrcRect
```
Rectangle currentSrcRect
```

Class ij.plugin.frame.ThresholdAdjuster extends PlugInDialog implements Serializable

Serialized Fields

plot
```
ij.plugin.frame.ThresholdPlot plot
```
thread
```
Thread thread
```
minValue
```
int minValue
```
maxValue
```
int maxValue
```
sliderRange
```
int sliderRange
```
doAutoAdjust
```
boolean doAutoAdjust
```
doReset
```
boolean doReset
```
doApplyLut
```
boolean doApplyLut
```
doStateChange
```
boolean doStateChange
```
doSet
```
boolean doSet
```
doBackground
```
boolean doBackground
```
panel
```
Panel panel
```
autoB
```
Button autoB
```
resetB
```
Button resetB
```
applyB
```
Button applyB
```
setB
```
Button setB
```
previousImageID
```
int previousImageID
```
previousImageType
```
int previousImageType
```
previousRoiHashCode
```
int previousRoiHashCode
```
previousMin
```
double previousMin
```
previousMax
```
double previousMax
```
previousSlice
```
int previousSlice
```
imageWasUpdated
```
boolean imageWasUpdated
```
ij
```
ImageJ ij
```
minThreshold
```
double minThreshold
```
maxThreshold
```
double maxThreshold
```
minSlider
```
Scrollbar minSlider
```
maxSlider
```
Scrollbar maxSlider
```
minLabel
```
TextField minLabel
```
maxLabel
```
TextField maxLabel
```
percentiles
```
Label percentiles
```
done
```
boolean done
```
lutColor
```
int lutColor
```
methodChoice
```
Choice methodChoice
```
modeChoice
```
Choice modeChoice
```
darkBackground
```
Checkbox darkBackground
```
stackHistogram
```
Checkbox stackHistogram
```
noResetButton
```
Checkbox noResetButton
```
firstActivation
```
boolean firstActivation
```
setButtonPressed
```
boolean setButtonPressed
```
noReset
```
boolean noReset
```
noResetChanged
```
boolean noResetChanged
```

Package ij.text

Class ij.text.TextPanel extends Panel implements Serializable

Serialized Fields

iGridWidth
```
int iGridWidth
```
iGridHeight
```
int iGridHeight
```
iX
```
int iX
```
iY
```
int iY
```
sColHead
```
String[] sColHead
```
vData
```
Vector<E> vData
```
iColWidth
```
int[] iColWidth
```
iColCount
```
int iColCount
```
iRowCount
```
int iRowCount
```
iRowHeight
```
int iRowHeight
```
iFirstRow
```
int iFirstRow
```
sbHoriz
```
Scrollbar sbHoriz
```
sbVert
```
Scrollbar sbVert
```
iSbWidth
```
int iSbWidth
```
iSbHeight
```
int iSbHeight
```
bDrag
```
boolean bDrag
```
iXDrag
```
int iXDrag
```
iColDrag
```
int iColDrag
```
headings
```
boolean headings
```
title
```
String title
```
labels
```
String labels
```
keyListener
```
KeyListener keyListener
```
resizeCursor
```
Cursor resizeCursor
```
defaultCursor
```
Cursor defaultCursor
```
selStart
```
int selStart
```
selEnd
```
int selEnd
```
selOrigin
```
int selOrigin
```
selLine
```
int selLine
```
tc
```
ij.text.TextCanvas tc
```
pm
```
PopupMenu pm
```
columnsManuallyAdjusted
```
boolean columnsManuallyAdjusted
```
mouseDownTime
```
long mouseDownTime
```
filePath
```
String filePath
```
rt
```
ResultsTable rt
```
unsavedLines
```
boolean unsavedLines
```
searchString
```
String searchString
```
fileMenu
```
Menu fileMenu
```
editMenu
```
Menu editMenu
```
menusExtended
```
boolean menusExtended
```
saveAsCSV
```
boolean saveAsCSV
```

Class ij.text.TextWindow extends Frame implements Serializable
- Serialized Fields
  - textPanel
```
TextPanel textPanel
```
  - antialiased
```
CheckboxMenuItem antialiased
```
  - sizes
```
int[] sizes
```
  - fontSize
```
int fontSize
```
  - mb
```
MenuBar mb
```

Serialized Form

Package ij

Class ij.ImageJ extends Frame implements Serializable

Serialized Fields

toolbar

statusBar

progressBar

statusLine

firstTime

applet

classes

exitWhenQuitting

quitting

quitMacro

keyPressedTime

actionPerformedTime

lastKeyCommand

embedded

windowClosed

hotkey

Class ij.ImageJApplet extends Applet implements Serializable

Package ij.gui

Class ij.gui.Arrow extends Line implements Serializable

Serialized Fields

style

headSize

doubleHeaded

outline

points

path

headShaftRatio

Class ij.gui.EllipseRoi extends PolygonRoi implements Serializable

Serialized Fields

xstart

ystart

aspectRatio

handle

Class ij.gui.FreehandRoi extends PolygonRoi implements Serializable

Class ij.gui.GenericDialog extends Dialog implements Serializable

Serialized Fields

numberField

stringField

checkbox

choice

slider

radioButtonGroups

textArea1

textArea2

defaultValues

defaultText

defaultStrings

defaultChoiceIndexes

theLabel

cancel

okay

no

help

okLabel

cancelLabel

helpLabel

wasCanceled

wasOKed

nfIndex

sfIndex

cbIndex

choiceIndex

textAreaIndex

radioButtonIndex

c

firstNumericField

firstSlider

invalidNumber

errorMessage

labels

macro

macroOptions

addToSameRow

addToSameRowCalled

topInset

leftInset