public static class MAFToGVCFPlugin.AssemblyVariantInfo
public AssemblyVariantInfo(@NotNull java.lang.String chr, int startPos, int endPos, @NotNull java.lang.String genotype, @NotNull java.lang.String refAllele, @NotNull java.lang.String altAllele, boolean isVariant, @NotNull kotlin.Array[] alleleDepths, @NotNull java.lang.String asmChrom, int asmStart, int asmEnd, @NotNull java.lang.String asmStrand)
@NotNull public java.lang.String getChr()
public void setChr(@NotNull java.lang.String p)
public int getStartPos()
public void setStartPos(int p)
public int getEndPos()
public void setEndPos(int p)
@NotNull public java.lang.String getGenotype()
public void setGenotype(@NotNull java.lang.String p)
@NotNull public java.lang.String getRefAllele()
public void setRefAllele(@NotNull java.lang.String p)
@NotNull public java.lang.String getAltAllele()
public void setAltAllele(@NotNull java.lang.String p)
public boolean isVariant()
public void setVariant(boolean p)
@NotNull public kotlin.Array[] getAlleleDepths()
public void setAlleleDepths(@NotNull kotlin.Array[] p)
@NotNull public java.lang.String getAsmChrom()
public void setAsmChrom(@NotNull java.lang.String p)
public int getAsmStart()
public void setAsmStart(int p)
public int getAsmEnd()
public void setAsmEnd(int p)
@NotNull public java.lang.String getAsmStrand()
public void setAsmStrand(@NotNull java.lang.String p)
@NotNull public java.lang.String component1()
public int component2()
public int component3()
@NotNull public java.lang.String component4()
@NotNull public java.lang.String component5()
@NotNull public java.lang.String component6()
public boolean component7()
@NotNull public kotlin.Array[] component8()
@NotNull public java.lang.String component9()
public int component10()
public int component11()
@NotNull public java.lang.String component12()
@NotNull public net.maizegenetics.pangenome.processAssemblyGenomes.MAFToGVCFPlugin.AssemblyVariantInfo copy(@NotNull java.lang.String chr, int startPos, int endPos, @NotNull java.lang.String genotype, @NotNull java.lang.String refAllele, @NotNull java.lang.String altAllele, boolean isVariant, @NotNull kotlin.Array[] alleleDepths, @NotNull java.lang.String asmChrom, int asmStart, int asmEnd, @NotNull java.lang.String asmStrand)
@NotNull public java.lang.String toString()
public int hashCode()
public boolean equals(@Nullable java.lang.Object p)