Uses of Package
net.maizegenetics.taxa.tree

Packages that use net.maizegenetics.taxa.tree

Package	Description
net.maizegenetics.analysis.association	Approaches for conducting GWAS including GLM and MLM approaches
net.maizegenetics.analysis.data	Plugins for manipulating datasets including reading, writing, and combining datasets
net.maizegenetics.analysis.tree	Plugins for creating trees based on genetic distance and displaying trees
net.maizegenetics.taxa.tree	Classes for providing the data structure of trees, for constructing and modifying trees, and for parameterizing trees (e.g., clock constraint).

Classes in net.maizegenetics.taxa.tree used by net.maizegenetics.analysis.association

Class and Description
Tree Interface for a phylogenetic or genealogical tree.

Classes in net.maizegenetics.taxa.tree used by net.maizegenetics.analysis.data

Class and Description
SimpleTree data structure for a binary/non-binary rooted/unrooted trees

Classes in net.maizegenetics.taxa.tree used by net.maizegenetics.analysis.tree

Class and Description
Tree Interface for a phylogenetic or genealogical tree.

Classes in net.maizegenetics.taxa.tree used by net.maizegenetics.taxa.tree

Class and Description
AttributeNode interface for a node (includes branch) in a binary/non-binary rooted/unrooted tree.
CladeSystem data structure for a set of splits
LabelMapping
MultiParameterized.ParameterAccessWatcher An interface for classes that wish to find out about particular parameter access
Node interface for a node (includes branch) in a binary/non-binary rooted/unrooted tree
Parameterized interface for class with (optimizable) parameters
SimpleTree data structure for a binary/non-binary rooted/unrooted trees
SplitSystem data structure for a set of splits
Tree Interface for a phylogenetic or genealogical tree.
Units interface holding unit constants
UnitsProvider interface for classes that can provide the related Units used, (as