DNAAlphabet
models
DNA_SIZE_SIZE
TwoBitFile
DatabaseVariantAnnotationField
projections
DatabaseVariantAnnotationRDD
variation
DbxrefField
projections
Delete
MdTagEvent
DinucCovariate
recalibration
DuplicateMetrics
read
databases
VariantContext
dataset
BaseQualityRecalibration
db
DbxrefField
OntologyTermField
dbsnpId
DatabaseVariantAnnotationField
dbxrefs
FeatureField
decoder
InputStreamWithDecoder
deferMerging
ADAMSaveAnyArgs
deletedBase
MdTag
deletions
MdTag
derivesFrom
FeatureField
description
RecordGroup
NucleotideContigFragmentField
disorient
ReferenceRegion
distance
ReferenceRegion
dna
Alphabet
downsampled
VariantCallingAnnotationsField
dumpObservationTableFile
BaseQualityRecalibration
duplicateRead
AlignmentRecordField
duplicatesPrimary
FlagStatMetrics
duplicatesSecondary
FlagStatMetrics