org.bdgenomics.adam.rdd.read

realignment

package realignment

Visibility
  1. Public
  2. All

Type Members

  1. class IndelRealignmentTarget extends Logging

  2. class IndelRealignmentTargetSerializer extends Serializer[IndelRealignmentTarget]

  3. class RealignmentTargetFinder extends Serializable with Logging

  4. case class TargetSet(set: TreeSet[IndelRealignmentTarget]) extends Serializable with Product

  5. class TargetSetSerializer extends Serializer[TargetSet]

  6. case class ZippedTargetSet(set: TreeSet[(IndelRealignmentTarget, Int)]) extends Serializable with Product

  7. class ZippedTargetSetSerializer extends Serializer[ZippedTargetSet]

Value Members

  1. object IndelRealignmentTarget

  2. object RealignmentTargetFinder extends Serializable

  3. object TargetOrdering extends Ordering[IndelRealignmentTarget]

  4. object TargetSet extends Serializable

  5. object ZippedTargetOrdering extends Ordering[(IndelRealignmentTarget, Int)]

Ungrouped