org.broadinstitute.hellbender.engine.filters

Class VariantTypesVariantFilter

java.lang.Object

org.broadinstitute.hellbender.engine.filters.VariantTypesVariantFilter

All Implemented Interfaces:

java.io.Serializable, java.util.function.Predicate<htsjdk.variant.variantcontext.VariantContext>, VariantFilter

public final class VariantTypesVariantFilter
extends java.lang.Object
implements VariantFilter

Keep only variants with any of these variant types.

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
VariantTypesVariantFilter(java.util.Set<htsjdk.variant.variantcontext.VariantContext.Type> includeTypes)

Method Summary

Modifier and Type	Method and Description
boolean	test(htsjdk.variant.variantcontext.VariantContext vc)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.broadinstitute.hellbender.engine.filters.VariantFilter

and, negate, or

Methods inherited from interface java.util.function.Predicate

and, isEqual, or

Constructor Detail

VariantTypesVariantFilter

public VariantTypesVariantFilter(java.util.Set<htsjdk.variant.variantcontext.VariantContext.Type> includeTypes)

Method Detail

test

public boolean test(htsjdk.variant.variantcontext.VariantContext vc)

Specified by:

test in interface java.util.function.Predicate<htsjdk.variant.variantcontext.VariantContext>