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Hierarchy For Package org.broadinstitute.hellbender.tools.funcotator
Package Hierarchies:
All Packages
Class Hierarchy
java.lang.Object
org.broadinstitute.hellbender.cmdline.
CommandLineProgram
(implements org.broadinstitute.barclay.argparser.CommandLinePluginProvider)
org.broadinstitute.hellbender.engine.
GATKTool
org.broadinstitute.hellbender.engine.
VariantWalkerBase
org.broadinstitute.hellbender.engine.
VariantWalker
org.broadinstitute.hellbender.tools.funcotator.
Funcotator
org.broadinstitute.hellbender.tools.funcotator.
DataSourceFuncotationFactory
(implements java.io.Closeable)
org.broadinstitute.hellbender.tools.funcotator.
FuncotatorArgumentDefinitions
org.broadinstitute.hellbender.tools.funcotator.
FuncotatorUtils
org.broadinstitute.hellbender.tools.funcotator.
OutputRenderer
(implements java.lang.AutoCloseable)
org.broadinstitute.hellbender.tools.funcotator.
SequenceComparison
java.lang.Throwable (implements java.io.Serializable)
java.lang.Exception
java.lang.RuntimeException
org.broadinstitute.hellbender.exceptions.
GATKException
org.broadinstitute.hellbender.tools.funcotator.
FuncotatorUtils.TranscriptCodingSequenceException
Interface Hierarchy
org.broadinstitute.hellbender.tools.funcotator.
Funcotation
Enum Hierarchy
java.lang.Object
java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
org.broadinstitute.hellbender.tools.funcotator.
FuncotatorArgumentDefinitions.DataSourceType
org.broadinstitute.hellbender.tools.funcotator.
FuncotatorArgumentDefinitions.OutputFormatType
org.broadinstitute.hellbender.tools.funcotator.
AminoAcid
org.broadinstitute.hellbender.tools.funcotator.
TranscriptSelectionMode
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