org.broadinstitute.hellbender.tools.walkers.genotyper

Enum GenotypeLikelihoodsCalculationModel

java.lang.Object

java.lang.Enum<GenotypeLikelihoodsCalculationModel>

org.broadinstitute.hellbender.tools.walkers.genotyper.GenotypeLikelihoodsCalculationModel

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<GenotypeLikelihoodsCalculationModel>

public enum GenotypeLikelihoodsCalculationModel
extends java.lang.Enum<GenotypeLikelihoodsCalculationModel>

The model representing how we calculate genotype likelihoods

Enum Constant Summary

Enum Constants

Enum Constant and Description
BOTH
GENERALPLOIDYINDEL
GENERALPLOIDYSNP
INDEL
SNP

Method Summary

Modifier and Type	Method and Description
static GenotypeLikelihoodsCalculationModel	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static GenotypeLikelihoodsCalculationModel[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

SNP

public static final GenotypeLikelihoodsCalculationModel SNP

INDEL

public static final GenotypeLikelihoodsCalculationModel INDEL

GENERALPLOIDYSNP

public static final GenotypeLikelihoodsCalculationModel GENERALPLOIDYSNP

GENERALPLOIDYINDEL

public static final GenotypeLikelihoodsCalculationModel GENERALPLOIDYINDEL

BOTH

public static final GenotypeLikelihoodsCalculationModel BOTH

Method Detail

values

public static GenotypeLikelihoodsCalculationModel[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (GenotypeLikelihoodsCalculationModel c : GenotypeLikelihoodsCalculationModel.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static GenotypeLikelihoodsCalculationModel valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null