Package org.broadinstitute.hellbender.utils.codecs.gtf

Enum Class GencodeGtfFeature.GenomicPhase

java.lang.Object

java.lang.Enum<GencodeGtfFeature.GenomicPhase>

org.broadinstitute.hellbender.utils.codecs.gtf.GencodeGtfFeature.GenomicPhase

All Implemented Interfaces:

Serializable, Comparable<GencodeGtfFeature.GenomicPhase>, Constable

Enclosing class:

GencodeGtfFeature

public static enum GencodeGtfFeature.GenomicPhase
extends Enum<GencodeGtfFeature.GenomicPhase>

Whether the first base of the CDS segment is the first (frame 0), second (frame 1) or third (frame 2) \ in the codon of the ORF. For more information, see: https://www.gencodegenes.org/data_format.html https://en.wikipedia.org/wiki/General_feature_format

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
DOT
ONE
TWO
ZERO

Method Summary

Modifier and Type	Method	Description
static GencodeGtfFeature.GenomicPhase	getEnum(String s)
String	toString()
static GencodeGtfFeature.GenomicPhase	valueOf(String name)	Returns the enum constant of this class with the specified name.
static GencodeGtfFeature.GenomicPhase[]	values()	Returns an array containing the constants of this enum class, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

ZERO

public static final GencodeGtfFeature.GenomicPhase ZERO

ONE

public static final GencodeGtfFeature.GenomicPhase ONE

TWO

public static final GencodeGtfFeature.GenomicPhase TWO

DOT

public static final GencodeGtfFeature.GenomicPhase DOT

Method Details

values

public static GencodeGtfFeature.GenomicPhase[] values()

Returns an array containing the constants of this enum class, in the order they are declared.

Returns:

an array containing the constants of this enum class, in the order they are declared

valueOf

public static GencodeGtfFeature.GenomicPhase valueOf(String name)

Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum class has no constant with the specified name

NullPointerException - if the argument is null

toString

public String toString()

Overrides:

toString in class Enum<GencodeGtfFeature.GenomicPhase>

getEnum

public static GencodeGtfFeature.GenomicPhase getEnum(String s)