Package org.broadinstitute.hellbender.utils.read.markduplicates

Class ReadsKey.KeyForPair

java.lang.Object

org.broadinstitute.hellbender.utils.read.markduplicates.ReadsKey

org.broadinstitute.hellbender.utils.read.markduplicates.ReadsKey.KeyForPair

Enclosing class:

ReadsKey

public static class ReadsKey.KeyForPair
extends ReadsKey

Key class for representing relevant duplicate marking identifiers into a two long key values for pair data data. Note: This class is intended for internal MarkDuplicatesSpark key purposes, it is only exposed so it can be accessed by GATKRegistrator for kryo serialization

Nested Class Summary

Nested classes/interfaces inherited from class org.broadinstitute.hellbender.utils.read.markduplicates.ReadsKey

ReadsKey.KeyForFragment, ReadsKey.KeyForPair

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
int	hashCode()
String	toString()

Methods inherited from class org.broadinstitute.hellbender.utils.read.markduplicates.ReadsKey

getKeyForFragment, getKeyForPair, hashKeyForPassthroughRead, keyForRead

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Method Details

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object