1. com
   1. com.github
      1. com.github.clulab
         1. com.github.clulab.eidos
            1. (case class)Version
            2. (object)
               Versions
2. org
   1. org.clulab
      1. org.clulab.wm
         1. org.clulab.wm.eidos
            1. (object)
               BuildInfo
            2. (object)
               EidosAliases
            3. (trait)EidosApp
            4. (trait)EidosConfigured
            5. (object)(class)EidosOptions
            6. (object)(class)EidosSystem
            7. (object)
               SimpleEidos
            1. org.clulab.wm.eidos.actions
               1. (object)(class)CausalBasicCorefHandler
               2. (object)(trait)CorefHandler
               3. (object)(class)EidosActions
            2. org.clulab.wm.eidos.apps
               1. org.clulab.wm.eidos.apps.batch
                  1. (object)
                     DiffDirs
                  2. (object)
                     DiffFiles
                  3. (object)
                     ExtractCdrMetaFromDirectory
                  4. (object)
                     ExtractCdrProcOnlyFromDirectory
                  5. (object)
                     ExtractCluFromDirectoryFiltered
                  6. (object)
                     ExtractCluMetaFromDirectory
                  7. (object)
                     ExtractCluMetaFromDirectoryFiltered
                  8. (object)
                     ExtractCluMetaFromDirectoryWithId
                  9. (object)
                     Fewsnet
                  10. (object)
                      FilterCluDateFromDirectory
                  11. (object)
                      FilterCluKeysFromDirectory
                  12. (object)
                      FilterWithMetaFromDirectory
                  13. (object)
                      FindMissingFiles
                  14. (object)
                      ReExtractCdrMetaFromDirectory
                  15. (object)
                      RegroundCdrMetaFromDirectory
                  16. (object)
                      RenameMetaFiles
                  17. (object)
                      SeparateCdrTextFromDirectory
               2. org.clulab.wm.eidos.apps.cache
                  1. (object)
                     CacheGeonames
                  2. (object)
                     CacheOntologies
               3. org.clulab.wm.eidos.apps.eval
                  1. (object)
                     EvalGroundings
                  2. (object)
                     EvalOntologyGrounders
                  3. (object)
                     EvalSeasonNorm
                  4. (object)
                     EvalTimeNorm
               4. org.clulab.wm.eidos.apps.examples
                  1. (object)
                     ExtractFromText
               5. org.clulab.wm.eidos.apps.extract
                  1. (object)
                     ExtractAndExport
                  2. (object)
                     ExtractDocumentFromDirectory
                  3. (object)
                     ExtractFromDirectory
                  4. (object)
                     ExtractFromFile
                  5. (object)
                     ExtractFromText
                  6. (object)
                     ExtractJsonLDFromFile
                  7. (object)
                     ExtractSemanticRoles
               6. org.clulab.wm.eidos.apps.filter
                  1. (object)
                     FilterJson
                  2. (object)
                     FilterJsonCanonicalNames
                  3. (object)
                     FilterJsonExtractions
                  4. (object)
                     FilterJsonGeoAndTime
                  5. (object)
                     FilterJsonLigatures
                  6. (object)
                     FilterJsonPretty
                  7. (object)
                     FilterJsonSource
                  8. (object)
                     FilterJsonText
               7. org.clulab.wm.eidos.apps.groundings
                  1. (object)
                     GroundCanonicalNames
                  2. (object)
                     GroundFromText
                  3. (object)
                     OntologyMapperApp
               8. org.clulab.wm.eidos.apps.misc
                  1. (object)
                     ExampleGenerator
                  2. (object)
                     HelloWorld
                  3. (object)
                     ShowOntologyVersion
                  4. (object)
                     WMseed
               9. org.clulab.wm.eidos.apps.reconstitute
                  1. (object)
                     ReconstituteAndExport
                  2. (object)
                     ReconstituteCombineAndExport
                  3. (object)
                     RoundTrip
               10. org.clulab.wm.eidos.apps.shell
                   1. (object)
                      EidosShell
                   2. (object)
                      EmptyEidosShell
               11. org.clulab.wm.eidos.apps.xsv
                   1. (object)
                      AnnotationSheetAndSummary
                   2. (object)
                      AnnotationTSV
                   3. (object)
                      ConcatenateXsvs
                   4. (object)
                      GenerateGoldGroundingTSV
                   5. (object)
                      MakeRuleTSVs
            3. org.clulab.wm.eidos.attachments
               1. (object)(class)AttachmentHandler
               2. (case class)AttachmentInfo
               3. (class)ContextAttachment
               4. (object)(class)DCTime
               5. (object)(class)Decrease
               6. (object)(class)EidosAttachment
               7. (object)(class)Hedging
               8. (object)(class)HypothesisHandler
               9. (object)(class)Increase
               10. (object)(class)Location
               11. (object)(class)Negation
               12. (object)(class)NegationHandler
               13. (object)(class)NegChange
               14. (object)(class)PosChange
               15. (object)(class)Property
               16. (object)(case class)Provenance
               17. (object)(class)Quantification
               18. (object)(class)Score
               19. (object)(class)Time
               20. (object)(class)TriggeredAttachment
            4. org.clulab.wm.eidos.components
               1. (object)(class)ComponentLoader
               2. (object)(case class)ComponentOpts
               3. (object)(class)ComponentsBuilder
               4. (case class)EidosComponents
            5. org.clulab.wm.eidos.context
               1. (case class)DCT
               2. (object)(class)GeoNormFinder
               3. (object)(case class)GeoPhraseID
               4. (object)(class)SeasonFinder
               5. (case class)SeasonMention
               6. (object)(trait)TimeNormFinder
               7. (class)TimeNormFinderNeural
               8. (class)TimeNormFinderSUTime
               9. (case class)TimeStep
               10. (case class)TimEx
            6. org.clulab.wm.eidos.document
               1. (object)(class)AnnotatedDocument
               2. (class)EidosSentenceClassifier
               3. (object)(class)SentenceClassifier
               1. org.clulab.wm.eidos.document.attachments
                  1. (object)(class)DctDocumentAttachment
                  2. (class)DctDocumentAttachmentBuilderFromJson
                  3. (class)DctDocumentAttachmentBuilderFromText
                  4. (object)(class)LocationDocumentAttachment
                  5. (class)LocationDocumentAttachmentBuilderFromJson
                  6. (class)LocationDocumentAttachmentBuilderFromText
                  7. (object)(class)RelevanceDocumentAttachment
                  8. (class)RelevanceDocumentAttachmentBuilderFromJson
                  9. (class)RelevanceDocumentAttachmentBuilderFromText
                  10. (object)(class)TitleDocumentAttachment
                  11. (class)TitleDocumentAttachmentBuilderFromJson
                  12. (class)TitleDocumentAttachmentBuilderFromText
            7. org.clulab.wm.eidos.expansion
               1. (object)(class)ArgumentExpander
               2. (object)(class)ConceptExpander
               3. (case class)Dependencies
               4. (object)(trait)Expander
               5. (object)
                  ExpansionUtils
               6. (object)(class)MostCompleteEventsKeeper
               7. (class)NestedArgumentExpander
               8. (object)(class)TextBoundExpander
            8. org.clulab.wm.eidos.exporters
               1. (class)CompositionalGroundingSheetExporter
               2. (class)DebugGroundingExporter
               3. (case class)EntityInfo
               4. (object)(trait)Exporter
               5. (object)(class)GroundExporter
               6. (class)GroundingAnnotationExporter
               7. (class)GroundingInsightExporter
               8. (case class)IncDecExporter
               9. (case class)JSONLDExporter
               10. (case class)SerializedExporter
               11. (object)(class)SerializedMentions
            9. org.clulab.wm.eidos.extraction
               1. (object)
                  EntityConstraints
               2. (object)
                  EntityHelper
               3. (object)(trait)Finder
               4. (object)(class)GazetteerEntityFinder
               5. (object)(class)OdinFinder
               6. (object)(class)RuleBasedEntityFinder
            10. org.clulab.wm.eidos.groundings
                1. (object)(case class)Alignments
                2. (case class)ConceptEmbedding
                3. (case class)ConceptExamples
                4. (object)(case class)ConceptIndicators
                5. (object)(case class)ConceptMatch
                6. (case class)ConceptPatterns
                7. (object)
                   DomainHandler
                8. (object)(trait)EidosWordToVec
                9. (class)FakeWordToVec
                10. (trait)IndividualGrounding
                11. (object)
                    MaaSHandler
                12. (object)
                    OntologyAliases
                13. (trait)OntologyGrounder
                14. (case class)OntologyGrounding
                15. (object)(class)OntologyHandler
                16. (object)
                    OntologyMapper
                17. (object)(case class)OntologyNodeGrounding
                18. (case class)PredicateGrounding
                19. (class)RealWordToVec
                1. org.clulab.wm.eidos.groundings.grounders
                   1. (trait)AdjectiveGrounder
                   2. (case class)AdjectiveGrounding
                   3. (object)(class)CompositionalGrounder
                   4. (object)(class)EidosAdjectiveGrounder
                   5. (object)(class)EidosOntologyGrounder
                   6. (class)FakeAdjectiveGrounder
                   7. (class)FlatOntologyGrounder
                   8. (case class)GroundedSpan
                   9. (class)InterventionGrounder
                   10. (object)(class)InterventionSieveGrounder
                   11. (object)(class)PredicateTuple
                   12. (case class)SentenceHelper
                   13. (object)(class)SRLCompositionalGrounder
            11. org.clulab.wm.eidos.mentions
                1. (object)(class)CrossSentenceEventMention
                2. (class)EidosCrossSentenceEventMention
                3. (class)EidosCrossSentenceMention
                4. (class)EidosEventMention
                5. (object)(class)EidosMention
                6. (class)EidosRelationMention
                7. (class)EidosTextBoundMention
                8. (object)
                   MentionUtils
                9. (object)
                   OdinMention
                10. (case class)TriggerInfo
            12. org.clulab.wm.eidos.metadata
                1. (object)(class)CdrText
                2. (object)(class)CluText
                3. (trait)EidosText
                4. (object)
                   JataText
                5. (object)(class)Metadata
                6. (object)(class)PdfInfoText
                7. (object)(class)PlainText
            13. org.clulab.wm.eidos.refiners
                1. (object)(class)DocumentRefiner
                2. (object)(class)EidosRefiner
                3. (object)(class)FinderRefiner
                4. (object)(class)OdinRefiner
                5. (object)(class)ProcessorRefiner
                6. (class)Refiner
                7. (object)(class)RefinerOptions
            14. org.clulab.wm.eidos.serialization
                1. org.clulab.wm.eidos.serialization.json
                   1. (object)
                      JsonUtils
                   2. (object)
                      WMCrossSentenceEventMention
                   3. (object)
                      WMJSONSerializer
                   1. org.clulab.wm.eidos.serialization.json.json
                      1. (object)
                         CrossSentenceEventMentionOps
                      2. (object)
                         CrossSentenceMentionOps
                      3. (object)
                         EventMentionOps
                      4. (object)
                         MentionOps
                      5. (object)
                         MentionSeq
                      6. (object)
                         OdinPathOps
                      7. (object)
                         RelationMentionOps
                      8. (object)
                         TextBoundMentionOps
                      9. (object)
                         WMCrossSentenceMention
                      10. (object)
                          WMEventMention
                      11. (object)
                          WMRelationMention
                      12. (object)
                          WMTextBoundMention
                2. org.clulab.wm.eidos.serialization.jsonld
                   1. (case class)DocumentSpec
                   2. (case class)Extraction
                   3. (class)IdAndDct
                   4. (class)IdAndDocument
                   5. (class)IdAndGeoPhraseId
                   6. (class)IdAndMention
                   7. (class)IdAndSentence
                   8. (class)IdAndTimex
                   9. (object)(class)IdAndValue
                   10. (class)IdAndWordSpec
                   11. (object)(class)JLDArgument
                   12. (object)(class)JLDAttachment
                   13. (object)(class)JLDConcept
                   14. (object)(class)JLDConceptEntity
                   15. (class)JLDContextAttachment
                   16. (object)(class)JLDCorpus
                   17. (object)(class)JLDDCT
                   18. (object)(class)JLDDependency
                   19. (object)(class)JLDDeserializer
                   20. (object)(class)JLDDocument
                   21. (object)(class)JLDExtraction
                   22. (object)(class)JLDExtractionComparator
                   23. (object)(class)JLDGeoID
                   24. (class)JLDGraphMapPair
                   25. (object)(class)JLDInterval
                   26. (object)(class)JLDModifier
                   27. (class)JLDObject
                   28. (object)(class)JLDOntologyGrounding
                   29. (object)(class)JLDOntologyGroundings
                   30. (object)(class)JLDOntologyPredicateGrounding
                   31. (object)(class)JLDProvenance
                   32. (object)(class)JLDRelation
                   33. (object)(class)JLDRelationCausation
                   34. (object)(class)JLDRelationCoreference
                   35. (object)(class)JLDRelationCorrelation
                   36. (object)(class)JLDRelationNegativeAffect
                   37. (object)(class)JLDRelationPositiveAffect
                   38. (class)JLDScoredAttachment
                   39. (object)(class)JLDSentence
                   40. (object)(class)JLDSerializer
                   41. (object)(class)JLDTimeInterval
                   42. (object)(class)JLDTimex
                   43. (object)(class)JLDTrigger
                   44. (class)JLDTriggeredAttachment
                   45. (object)(class)JLDWord
                   46. (trait)Regrounding
                   47. (case class)SentencesSpec
                   48. (object)(class)TidyJObject
                   49. (case class)WordSpec
                3. org.clulab.wm.eidos.serialization.simple
                   1. (object)(class)SimpleSerializer
                4. org.clulab.wm.eidos.serialization.web
                   1. (object)
                      BuildInfoObj
                   2. (class)EidosObj
                   3. (class)EntityGrounder
                   4. (case class)GroundedEntity
                   5. (class)GroundedObj
                   6. (class)ParseObj
                   7. (class)SyntaxObj
                   8. (class)WebSerializer
            15. org.clulab.wm.eidos.utils
                1. (object)
                   DisplayUtils
                2. (object)
                   Domain
                3. (object)(class)DomainParams
                4. (object)(class)FoundBy
                5. (trait)GroundingInfoSupplier
                6. (object)
                   GroundingUtils
                7. (object)(class)JavaLauncher
                8. (object)(class)Launcher
                9. (object)
                   OdinUtils
                10. (object)
                    PlayUtils
                11. (object)(class)SbtLauncher
                12. (object)(class)StopwordManager
                13. (object)
                    Unordered
3. utest