REACHMentionSeq
json
REGULATION_EVENTS
ReachConstants
REG_LABELS
DarpaActions
REMOVAL_EVENTS
ReachConstants
RRNInput
data
ReachConstants
reach
ReachContextKBLister
grounding
ReachEntityLookup
grounding
ReachGrounder
grounding
ReachIMKBLookups
grounding
ReachIMKBMentionLookups
grounding
ReachInputFilePattern
reach
ReachKBConstants
grounding
ReachKBKeyTransforms
grounding
ReachKBUtils
grounding
ReachShell
reach
ReachSystem
reach
ReadPapers
reach
RegulationHandler
darpa
Relation
brat
Resolutions
grounding
RuleBasedContextEngine
context
RuleReader
reach
Rules
RuleReader
rdfId
BioPAXElementUtils
reach
clulab ReachShell
reachSystem
PaperReader
readAndCheckBioPax
EntityChecker
readDocNames
DocListOverlap
readFile
RuleReader brat FileReader
readFromCsv2Map
DeepLearningPolarityClassifier
readFromSpreadsheet
DeepLearningPolarityClassifier
readGZFile
FileReader
readIOBLabels
InstanceFinder
readIds
NxmlSearcher
readLines
ReachKBUtils
readMapFile
NxmlIndexer
readNxml
NxmlIndexer
readPaper
PaperReader
readPapers
PaperReader
readResource
RuleReader
readStandOff
Brat
reader
ReachShell NxmlSearcher BRI
referenceURI
ExternalKBAccessor IMKBMetaInfo
regexFromTriggers
Labeler
reguTestZ
darpa
relationLUT
IdTracker
relationships
XReferrableUtils
reload
RuleReader
removeDummy
DarpaActions
removeExtension
FileReader
resolutions
IMKBLookup InMemoryKB
resolve
Coref AzFailsafeKBML ExternalKBAccessor IMKBLookup IMKBMentionLookup KBLookup KBMentionLookup
resolveByASpecies
AzFailsafeKBML IMKBLookup IMKBMentionLookup KBLookup KBMentionLookup
resolveBySpecies
AzFailsafeKBML IMKBLookup IMKBMentionLookup KBLookup KBMentionLookup
resolveComplexEvents
Coref
resolveCoref
ReachSystem
resolveDisplay
ReachSystem
resolveDisplayForArguments
ReachSystem
resolveDisplayForEntity
ReachSystem
resolveHuman
AzFailsafeKBML IMKBLookup IMKBMentionLookup KBLookup KBMentionLookup
resolveNoSpecies
AzFailsafeKBML IMKBLookup IMKBMentionLookup KBLookup KBMentionLookup
resolveSimpleEvents
Coref
resolveTBMs
Coref
resource
Normalization
resourceID
ExternalKBAccessor
resourceId
IMKBMetaInfo
resourcesPath
RuleReader
right
ConversionUtils
roots
MentionManager
runInstance
DeepLearningPolarityClassifier
running
ReachShell