REGULATION_EVENTS
MentionManager
RUN_ID
JsonOutputter
ReachCLI
reach
ReachCSV
reach
ReachResults
Api
ReachShell
reach
ReachSystem
reach
Relation
brat
Response
ApiRuler
RuleGenerator
ner
RuleReader
reach
RuleWriter
ner
Ruler
apis
RulerResults
apis
Rules
RuleReader
RunNxml2Fries
nxml
rdfId
BioPAXElementUtils
reach
sista
ReachCSV
ReachShell
Api
ApiRuler
Ruler
BroscoiDriver
GroundDriver
reachRules
Ruler
readAndCheckBioPax
EntityChecker
readAndFillKB
LocalKBAccessor
LocalKBLookup
readFile
RuleReader
brat
FileReader
readGZFile
FileReader
readMapFile
NxmlIndexer
readNxml
NxmlReader
NxmlIndexer
readResource
RuleReader
readStandOff
Brat
reader
ReachShell
Api
ApiRuler
NxmlSearcher
BRI
referenceURI
ExternalKBAccessor
regexFromTriggers
Labeler
relationLUT
IdTracker
relationships
XReferrableUtils
reload
RuleReader
removeDummy
DarpaActions
removeExtension
FileReader
resolve
ReachSystem
ExternalKBAccessor
AzFailsafeKBAccessor
LocalKBAccessor
LocalKBLookup
LocalProteinFamilyKBAccessor
LocalProteinKBAccessor
SpeciatedKBLookup
resolveBySpecies
LocalKBAccessor
LocalKBLookup
SpeciatedKBAccessor
SpeciatedKBLookup
resolveDisplay
ReachSystem
resolveDisplayForArguments
ReachSystem
resolveHuman
SpeciatedKBAccessor
SpeciatedKBLookup
resource
Normalization
resourceID
ExternalKBAccessor
AuxBioProcessKBAccessor
AuxMetaboliteKBAccessor
AuxProteinKBAccessor
AzFailsafeKBAccessor
LocalKBAccessor
LocalKBLookup
StaticCellLocationKBAccessor
StaticCellLocationKBLookup
StaticChemicalKBAccessor
StaticChemicalKBLookup
StaticMetaboliteKBAccessor
StaticMetaboliteKBLookup
StaticProteinFamilyKBAccessor
StaticProteinFamilyKBLookup
StaticProteinKBAccessor
StaticProteinKBLookup
StaticTissueTypeKBAccessor
StaticTissueTypeKBLookup
resourcesPath
RuleReader
right
ConversionUtils
roots
MentionManager
ruleMap
RulerResults
rules
RulerResults
runOnFriesEntry
Api
runOnFriesEntryToJava
Api
runOnNxml
Api
runOnNxmlToJava
Api
runOnText
Api
runOnTextToJava
Api
runOpen
Ruler
runReach
Ruler
running
ReachShell