Deprecated API

Contents

• Deprecated Interfaces
• Deprecated Classes
• Deprecated Fields
• Deprecated Methods
• Deprecated Constructors
• Deprecated Annotation Type Elements

Deprecated Interfaces

Interface and Description
org.scijava.platform.AppEventService Use AppService and App instead.
org.scijava.script.CodeGenerator To be removed in SciJava Common 3.0.0.

Deprecated Classes

Class and Description
org.scijava.util.CheckSezpoz
org.scijava.script.CodeGeneratorJava To be removed in SciJava Common 3.0.0.
org.scijava.util.CombineAnnotations Use AnnotationCombiner instead.
org.scijava.console.ConsoleUtils Use alternatives instead (see individual method docs).
org.scijava.util.ConversionUtils use ConvertService and Types
org.scijava.platform.DefaultAppEventService Use AppService and App instead.
org.scijava.util.GenericUtils Use Types instead.
org.scijava.ui.headlessUI.HeadlessUI Use HeadlessUI instead.
org.scijava.script.InvocationObject To be removed in SciJava Common 3.0.0.
org.scijava.script.ParameterObject To be removed in SciJava Common 3.0.0.
org.scijava.util.Prefs See PrefService
org.scijava.command.console.RunArgument Use RunArgument instead.
org.scijava.script.console.RunScriptArgument Use RunArgument instead.
org.scijava.plugin.SortablePlugin Use AbstractRichPlugin instead.

Deprecated Fields

Field and Description
org.scijava.plugin.Plugin.APPLICATION_MENU_ROOT Use UIDetails.APPLICATION_MENU_ROOT instead.
org.scijava.plugin.Plugin.CONTEXT_MENU_ROOT Use a context-specific menu root string instead. This one is too general. There is no such thing as a "default context menu" since such a thing wouldn't be a context menu!
org.scijava.log.LogService.DEBUG Use LogLevel.DEBUG.
org.scijava.log.LogService.ERROR Use LogLevel.ERROR.
org.scijava.util.CheckSezpoz.FILE_NAME
org.scijava.Priority.FIRST_PRIORITY Use Priority.FIRST instead.
org.scijava.Priority.HIGH_PRIORITY Use Priority.HIGH instead.
org.scijava.log.LogService.INFO Use LogLevel.INFO.
org.scijava.Priority.LAST_PRIORITY Use Priority.LAST instead.
org.scijava.Priority.LOW_PRIORITY Use Priority.LOW instead.
org.scijava.ui.headlessUI.HeadlessUI.NAME Use HeadlessUI.NAME instead.
org.scijava.log.LogService.NONE Use LogLevel.NONE.
org.scijava.Priority.NORMAL_PRIORITY Use Priority.NORMAL instead.
org.scijava.log.LogService.TRACE Use LogLevel.TRACE.
org.scijava.util.CheckSezpoz.verbose
org.scijava.Priority.VERY_HIGH_PRIORITY Use Priority.VERY_HIGH instead.
org.scijava.Priority.VERY_LOW_PRIORITY Use Priority.VERY_LOW instead.
org.scijava.log.LogService.WARN Use LogLevel.WARN.

Deprecated Methods

Method and Description
org.scijava.platform.AppEventService.about() Use App.about() instead.
org.scijava.util.ConversionUtils.canAssign(Class<?>, Class<?>) use Types.isAssignable(java.lang.reflect.Type, java.lang.reflect.Type)
org.scijava.util.ConversionUtils.canAssign(Object, Class<?>) use Types.isInstance(java.lang.Object, java.lang.Class<?>)
org.scijava.util.ClassUtils.canCast(Class<?>, Class<?>) use Types.isAssignable(Type, Type)
org.scijava.util.ConversionUtils.canCast(Class<?>, Class<?>) use Types.isAssignable(java.lang.reflect.Type, java.lang.reflect.Type)
org.scijava.util.ClassUtils.canCast(Object, Class<?>) use Types.isInstance(Object, Class)
org.scijava.util.ConversionUtils.canCast(Object, Class<?>) use Types.isInstance(java.lang.Object, java.lang.Class<?>)
org.scijava.util.ClassUtils.canConvert(Class<?>, Class<?>) use ConversionUtils.canConvert(Class, Class)
org.scijava.util.ConversionUtils.canConvert(Class<?>, Class<?>)
org.scijava.convert.Converter.canConvert(Class<?>, Class<?>) Use Converter.canConvert(Object, Class)
org.scijava.convert.DefaultConverter.canConvert(Class<?>, Class<?>)
org.scijava.util.ConversionUtils.canConvert(Class<?>, Type)
org.scijava.convert.Converter.canConvert(Class<?>, Type) Use Converter.canConvert(Object, Type)
org.scijava.convert.DefaultConverter.canConvert(Class<?>, Type)
org.scijava.convert.AbstractConverter.canConvert(Class<?>, Type)
org.scijava.util.ClassUtils.canConvert(Object, Class<?>) use ConversionUtils.canConvert(Object, Class)
org.scijava.util.ConversionUtils.canConvert(Object, Class<?>)
org.scijava.util.ConversionUtils.canConvert(Object, Type)
org.scijava.util.ClassUtils.cast(Object, Class<T>) use Types.cast(Object, Class)
org.scijava.util.ConversionUtils.cast(Object, Class<T>) use Types.cast(java.lang.Object, java.lang.Class<T>)
org.scijava.util.CheckSezpoz.check(boolean)
org.scijava.util.CheckSezpoz.check(File)
org.scijava.util.CheckSezpoz.checkDirectory(File)
org.scijava.util.CheckSezpoz.checkDirectory(File, File, long)
org.scijava.util.CheckSezpoz.checkJar(File)
org.scijava.prefs.PrefService.clear(Class<?>, String) Use PrefService.remove(Class, String).
org.scijava.prefs.DefaultPrefService.clear(Class<?>, String)
org.scijava.prefs.PrefService.clear(String) Use PrefService.remove(Class, String) or PrefService.clear(Class).
org.scijava.prefs.PrefService.clear(String, String) Use PrefService.remove(Class, String).
org.scijava.prefs.DefaultPrefService.clear(String, String)
org.scijava.util.CombineAnnotations.combine() Use AnnotationCombiner.combine(File) instead.
org.scijava.util.ClassUtils.convert(Object, Class<T>) use ConversionUtils.convert(Object, Class)
org.scijava.util.ConversionUtils.convert(Object, Class<T>)
org.scijava.util.ConversionUtils.convert(Object, Type)
org.scijava.util.ConversionUtils.convertToEnum(String, Class<T>) use Types.enumValue(java.lang.String, java.lang.Class<T>)
org.scijava.util.MiscUtils.equal(Object, Object) Use Objects.equals(Object, Object) instead.
org.scijava.util.CheckSezpoz.fix(File, File)
org.scijava.prefs.PrefService.get(String) Use PrefService.get(Class, String).
org.scijava.prefs.PrefService.get(String, String) Use PrefService.get(Class, String, String).
org.scijava.util.CombineAnnotations.getAnnotationFiles() Use AnnotationCombiner.getAnnotationFiles() instead.
org.scijava.platform.PlatformService.getAppEventService() Use AppService and App instead.
org.scijava.util.ClassUtils.getArrayClass(Class<?>) Use Types.array(Class) instead.
org.scijava.prefs.PrefService.getBoolean(String, boolean) Use PrefService.getBoolean(Class, String, boolean).
org.scijava.util.GenericUtils.getClass(Type) Use Types.raw(java.lang.reflect.Type) instead.
org.scijava.util.ConversionUtils.getClass(Type) use Types.raw(java.lang.reflect.Type)
org.scijava.util.GenericUtils.getClasses(Type) Use Types.raws(java.lang.reflect.Type) instead.
org.scijava.platform.AppEventService.getCommands() Tag relevant commands instead: attrs = { @Attr(name = "app-command") }
org.scijava.platform.PlatformService.getCommandService() Use PlatformService.commandService() instead.
org.scijava.util.GenericUtils.getComponentClass(Type) Use Types.component(java.lang.reflect.Type) and Types.raw(java.lang.reflect.Type) instead.
org.scijava.util.ConversionUtils.getComponentClass(Type) use Types.raws(java.lang.reflect.Type) and Types.component(java.lang.reflect.Type)
org.scijava.util.GenericUtils.getComponentType(Type) Use Types.component(java.lang.reflect.Type) instead.
org.scijava.prefs.PrefService.getDouble(String, double) Use PrefService.getDouble(Class, String, double).
org.scijava.input.InputService.getEventService() Use InputService.eventService() instead.
org.scijava.object.ObjectService.getEventService() Use ObjectService.eventService() instead.
org.scijava.platform.PlatformService.getEventService() Use PlatformService.eventService() instead.
org.scijava.command.CommandService.getEventService() Use CommandService.eventService() instead.
org.scijava.display.DisplayService.getEventService() Use DisplayService.eventService() instead.
org.scijava.util.ClassUtils.getField(Class<?>, String) Use Types.field(java.lang.Class<?>, java.lang.String) instead.
org.scijava.util.ClassUtils.getField(String, String) Use Types.field(java.lang.Class<?>, java.lang.String) instead.
org.scijava.util.GenericUtils.getFieldClasses(Field, Class<?>) Use Types.fieldType(Field, Class) and Types.raws(java.lang.reflect.Type) instead.
org.scijava.util.GenericUtils.getFieldType(Field, Class<?>) Use Types.fieldType(Field, Class) instead.
org.scijava.prefs.PrefService.getFloat(String, float) Use PrefService.getFloat(Class, String, float).
org.scijava.util.ClassUtils.getGenericType(Field, Class<?>) Use Types.fieldType(Field, Class) instead.
org.scijava.convert.ConvertService.getHandler(Class<?>, Class<?>) Use ConvertService.getHandler(Object, Class)
org.scijava.convert.ConvertService.getHandler(Class<?>, Type) Use ConvertService.getHandler(Object, Type)
org.scijava.prefs.PrefService.getInt(String, int) Use PrefService.getInt(Class, String, int).
org.scijava.prefs.PrefService.getIterable(Class<?>, String) Use PrefService.getList(Class, String).
org.scijava.prefs.DefaultPrefService.getIterable(Class<?>, String)
org.scijava.prefs.PrefService.getIterable(String) User PrefService.getList(Class, String).
org.scijava.script.ScriptModule.getLanguage() Use ScriptInfo.getLanguage() instead.
org.scijava.prefs.PrefService.getList(Class<?>) Use PrefService.getList(Class, String).
org.scijava.prefs.DefaultPrefService.getList(Class<?>)
org.scijava.prefs.PrefService.getList(String) Use PrefService.getList(Class, String).
org.scijava.prefs.PrefService.getList(String, String) Use PrefService.getList(Class, String).
org.scijava.prefs.DefaultPrefService.getList(String, String)
org.scijava.util.ClassUtils.getLocation(Class<?>) Use Types.location(java.lang.Class<?>) and Types.load(java.lang.String) instead.
org.scijava.util.ClassUtils.getLocation(String) Use Types.location(java.lang.Class<?>) and Types.load(java.lang.String) instead.
org.scijava.util.ClassUtils.getLocation(String, ClassLoader) Use Types.location(java.lang.Class<?>) and Types.load(java.lang.String) instead.
org.scijava.prefs.PrefService.getLong(String, long) Use PrefService.getLong(Class, String, long).
org.scijava.prefs.PrefService.getMap(Class<?>) Use PrefService.getMap(Class, String).
org.scijava.prefs.DefaultPrefService.getMap(Class<?>)
org.scijava.prefs.PrefService.getMap(String) Use PrefService.getMap(Class, String).
org.scijava.prefs.PrefService.getMap(String, String) Use PrefService.getMap(Class, String).
org.scijava.prefs.DefaultPrefService.getMap(String, String)
org.scijava.util.GenericUtils.getMethodReturnClasses(Method, Class<?>) Use Types.methodReturnType(java.lang.reflect.Method, java.lang.Class<?>) and Types.raws(java.lang.reflect.Type) instead.
org.scijava.util.GenericUtils.getMethodReturnType(Method, Class<?>) Use Types.methodReturnType(java.lang.reflect.Method, java.lang.Class<?>) instead.
org.scijava.command.CommandService.getModuleService() Use CommandService.moduleService() instead.
org.scijava.util.ClassUtils.getNonprimitiveType(Class<T>) use Types.box(Class)
org.scijava.util.ConversionUtils.getNonprimitiveType(Class<T>) use Types.box(java.lang.Class<T>)
org.scijava.util.ClassUtils.getNullValue(Class<T>) use Types.nullValue(Class)
org.scijava.util.ConversionUtils.getNullValue(Class<T>) Use Types.nullValue(java.lang.Class<T>) instead.
org.scijava.display.DisplayService.getObjectService() Use DisplayService.objectService() instead.
org.scijava.display.DisplayService.getPluginService() Use DisplayService.pluginService() instead.
org.scijava.plugin.PTService.getPluginService() Use PTService.pluginService() instead.
org.scijava.log.AbstractLogService.getPrefix(int) Use LogLevel.prefix(int) instead.
org.scijava.util.ConversionUtils.getPrimitiveType(Class<T>) use Types.unbox(java.lang.Class<T>)
org.scijava.util.GenericUtils.getTypeParameter(Type, Class<?>, int) Use Types.param(java.lang.reflect.Type, java.lang.Class<?>, int) instead.
org.scijava.util.ClassUtils.getTypes(Field, Class<?>) Use Types.fieldType(Field, Class) and Types.raws(java.lang.reflect.Type) instead.
org.scijava.util.ClassUtils.hasClass(String) Use Types.load(String) instead.
org.scijava.util.ClassUtils.hasClass(String, ClassLoader) Use Types.load(String, ClassLoader) instead.
org.scijava.console.ConsoleUtils.hasParam(LinkedList<String>) Use AbstractConsoleArgument.getParam(LinkedList) instead.
org.scijava.util.ClassUtils.isBoolean(Class<?>) Use Types.isBoolean(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isByte(Class<?>) Use Types.isByte(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isCharacter(Class<?>) Use Types.isCharacter(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isDouble(Class<?>) Use Types.isDouble(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isFloat(Class<?>) Use Types.isFloat(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isInteger(Class<?>) Use Types.isInteger(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isLong(Class<?>) Use Types.isLong(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isNumber(Class<?>) Use Types.isNumber(java.lang.Class<?>) instead.
org.scijava.module.Module.isResolved(String) Use Module.isInputResolved(String) instead.
org.scijava.script.ScriptInfo.isReturnValueDeclared() Use ScriptInfo.isReturnValueAppended() instead.
org.scijava.util.ClassUtils.isShort(Class<?>) Use Types.isShort(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.isText(Class<?>) Use Types.isText(java.lang.Class<?>) instead.
org.scijava.util.ClassUtils.loadClass(String) Use Types.load(String) instead.
org.scijava.util.ClassUtils.loadClass(String, boolean) Use Types.load(String, boolean) instead.
org.scijava.util.ClassUtils.loadClass(String, ClassLoader) Use Types.load(String, ClassLoader) instead.
org.scijava.util.ClassUtils.loadClass(String, ClassLoader, boolean) Use Types.load(String, ClassLoader, boolean) instead.
org.scijava.module.ModuleItem.loadValue()
org.scijava.module.AbstractModuleItem.loadValue()
org.scijava.util.CombineAnnotations.main(String[]) Use AnnotationCombiner.main(String[]) instead.
org.scijava.util.FileUtils.matchVersionedFilename(String) see FileUtils.stripFilenameVersion(String)
org.scijava.platform.DefaultAppEventService.onEvent(AppAboutEvent)
org.scijava.platform.DefaultAppEventService.onEvent(AppPreferencesEvent)
org.scijava.platform.DefaultAppEventService.onEvent(AppQuitEvent)
org.scijava.console.ConsoleUtils.parseParameterString(String) Use ParseService instead.
org.scijava.console.ConsoleUtils.parseParameterString(String, LogService) Use ParseService instead.
org.scijava.console.ConsoleUtils.parseParameterString(String, ModuleInfo) Use ParseService instead.
org.scijava.console.ConsoleUtils.parseParameterString(String, ModuleInfo, LogService) Use ParseService instead.
org.scijava.platform.AppEventService.prefs() Use App.prefs() instead.
org.scijava.prefs.PrefService.put(String, boolean) Use PrefService.put(Class, String, boolean).
org.scijava.prefs.PrefService.put(String, double) Use PrefService.put(Class, String, double).
org.scijava.prefs.PrefService.put(String, float) Use PrefService.put(Class, String, float).
org.scijava.prefs.PrefService.put(String, int) Use PrefService.put(Class, String, int).
org.scijava.prefs.PrefService.put(String, long) Use PrefService.put(Class, String, long).
org.scijava.prefs.PrefService.put(String, String) Use PrefService.put(Class, String, String).
org.scijava.prefs.PrefService.putIterable(Class<?>, Iterable<String>, String) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.PrefService.putIterable(Iterable<String>, String) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.PrefService.putList(Class<?>, List<String>) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.DefaultPrefService.putList(Class<?>, List<String>)
org.scijava.prefs.PrefService.putList(Class<?>, List<String>, String) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.PrefService.putList(List<String>, String) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.PrefService.putList(String, List<String>) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.DefaultPrefService.putList(String, List<String>)
org.scijava.prefs.PrefService.putList(String, List<String>, String) Use PrefService.put(Class, String, Iterable).
org.scijava.prefs.DefaultPrefService.putList(String, List<String>, String)
org.scijava.prefs.PrefService.putMap(Class<?>, Map<String, String>) Use PrefService.put(Class, String, Map).
org.scijava.prefs.DefaultPrefService.putMap(Class<?>, Map<String, String>)
org.scijava.prefs.PrefService.putMap(Class<?>, Map<String, String>, String) Use PrefService.put(Class, String, Map).
org.scijava.prefs.PrefService.putMap(Map<String, String>, String) Use PrefService.put(Class, String, Map).
org.scijava.prefs.PrefService.putMap(String, Map<String, String>) Use PrefService.put(Class, String, Map).
org.scijava.prefs.DefaultPrefService.putMap(String, Map<String, String>)
org.scijava.prefs.PrefService.putMap(String, Map<String, String>, String) Use PrefService.put(Class, String, Map).
org.scijava.prefs.DefaultPrefService.putMap(String, Map<String, String>, String)
org.scijava.platform.AppEventService.quit() Use App.quit() instead.
org.scijava.prefs.PrefService.remove(String, String) Use PrefService.remove(Class, String).
org.scijava.prefs.DefaultPrefService.remove(String, String)
org.scijava.module.ModuleItem.saveValue(T)
org.scijava.module.AbstractModuleItem.saveValue(T)
org.scijava.script.ScriptModule.setLanguage(ScriptLanguage) Use ScriptInfo.setLanguage(ScriptLanguage) instead.
org.scijava.module.Module.setResolved(String, boolean) Use Module.resolveInput(String) and Module.unresolveInput(String) instead.
org.scijava.convert.ConvertService.supports(Class<?>, Class<?>) Use ConvertService.supports(Object, Class)
org.scijava.convert.ConvertService.supports(Class<?>, Type) Use ConvertService.supports(Object, Type)
org.scijava.util.CheckSezpoz.writeXMLFile(Document, File)

Deprecated Constructors

Constructor and Description
org.scijava.util.CombineAnnotations() Use AnnotationCombiner.AnnotationCombiner() instead.
org.scijava.script.DefaultScriptInterpreter(PrefService, ScriptService, ScriptLanguage) Use DefaultScriptInterpreter.DefaultScriptInterpreter(ScriptLanguage) instead.
org.scijava.script.ScriptFinder(ScriptService) Use ScriptFinder.ScriptFinder(Context) instead.
org.scijava.script.ScriptLanguageIndex()

Deprecated Annotation Type Elements

Annotation Type Element and Description
org.scijava.plugin.Parameter.columns Replaced by Parameter.style().