case class Amplicon(chrom: String, left_start: Int, left_end: Int, right_start: Int, right_end: Int, id: Option[String] = None) extends GenomicSpan with Metric with Product with Serializable

A Locatable Amplicon class.

chrom

the chromosome for the amplicon

left_start

the 1-based start position of the left-most primer

left_end

the 1-based end position inclusive of the left-most primer

right_start

the 1-based start position of the right-most primer

right_end

the 1-based end position inclusive of the right-most primer

Linear Supertypes
Serializable, Serializable, Metric, Iterable[(String, String)], IterableLike[(String, String), Iterable[(String, String)]], GenIterable[(String, String)], GenIterableLike[(String, String), Iterable[(String, String)]], Traversable[(String, String)], GenTraversable[(String, String)], GenericTraversableTemplate[(String, String), Iterable], TraversableLike[(String, String), Iterable[(String, String)]], GenTraversableLike[(String, String), Iterable[(String, String)]], Parallelizable[(String, String), ParIterable[(String, String)]], TraversableOnce[(String, String)], GenTraversableOnce[(String, String)], FilterMonadic[(String, String), Iterable[(String, String)]], HasNewBuilder[(String, String), Iterable[(String, String)] @scala.annotation.unchecked.uncheckedVariance], Product, Equals, GenomicSpan, Locatable, AnyRef, Any
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Inherited
  1. Amplicon
  2. Serializable
  3. Serializable
  4. Metric
  5. Iterable
  6. IterableLike
  7. GenIterable
  8. GenIterableLike
  9. Traversable
  10. GenTraversable
  11. GenericTraversableTemplate
  12. TraversableLike
  13. GenTraversableLike
  14. Parallelizable
  15. TraversableOnce
  16. GenTraversableOnce
  17. FilterMonadic
  18. HasNewBuilder
  19. Product
  20. Equals
  21. GenomicSpan
  22. Locatable
  23. AnyRef
  24. Any
Implicitly
  1. by CollectionsHaveToParArray
  2. by MonadOps
  3. by any2stringadd
  4. by StringFormat
  5. by Ensuring
  6. by ArrowAssoc
  7. by alternateImplicit
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new Amplicon(chrom: String, left_start: Int, left_end: Int, right_start: Int, right_end: Int, id: Option[String] = None)

    chrom

    the chromosome for the amplicon

    left_start

    the 1-based start position of the left-most primer

    left_end

    the 1-based end position inclusive of the left-most primer

    right_start

    the 1-based start position of the right-most primer

    right_end

    the 1-based end position inclusive of the right-most primer

Type Members

  1. type Self = Iterable[(String, String)]
    Attributes
    protected[this]
    Definition Classes
    TraversableLike
  2. class WithFilter extends FilterMonadic[A, Repr]
    Definition Classes
    TraversableLike

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. def +(other: String): String
    Implicit
    This member is added by an implicit conversion from Amplicon to any2stringadd[Amplicon] performed by method any2stringadd in scala.Predef.
    Definition Classes
    any2stringadd
  4. def ++[B >: (String, String), That](that: GenTraversableOnce[B])(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  5. def ++:[B >: (String, String), That](that: Traversable[B])(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike
  6. def ++:[B >: (String, String), That](that: TraversableOnce[B])(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike
  7. def ->[B](y: B): (Amplicon, B)
    Implicit
    This member is added by an implicit conversion from Amplicon to ArrowAssoc[Amplicon] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc
    Annotations
    @inline()
  8. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  9. def addString(b: StringBuilder): StringBuilder
    Definition Classes
    TraversableOnce
  10. def addString(b: StringBuilder, sep: String): StringBuilder
    Definition Classes
    TraversableOnce
  11. def addString(b: StringBuilder, start: String, sep: String, end: String): StringBuilder
    Definition Classes
    TraversableOnce
  12. def aggregate[B](z: ⇒ B)(seqop: (B, (String, String)) ⇒ B, combop: (B, B) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  13. def ampliconLocation: String
  14. def apply(name: String): String

    Gets the value of the field by name.

    Gets the value of the field by name.

    Definition Classes
    Metric
  15. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  16. def canEqual(that: Any): Boolean
    Definition Classes
    IterableLike → Equals
  17. val chrom: String
  18. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  19. def collect[B, That](pf: PartialFunction[(String, String), B])(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  20. def collectFirst[B](pf: PartialFunction[(String, String), B]): Option[B]
    Definition Classes
    TraversableOnce
  21. def companion: GenericCompanion[Iterable]
    Definition Classes
    Iterable → GenIterable → Traversable → GenTraversable → GenericTraversableTemplate
  22. def contains(arg0: Locatable): Boolean
    Definition Classes
    Locatable
  23. def contig: String
    Definition Classes
    Amplicon → GenomicSpan
    Annotations
    @inline()
  24. def contigsMatch(arg0: Locatable): Boolean
    Definition Classes
    Locatable
  25. def copyToArray[B >: (String, String)](xs: Array[B], start: Int, len: Int): Unit
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  26. def copyToArray[B >: (String, String)](xs: Array[B]): Unit
    Definition Classes
    TraversableOnce → GenTraversableOnce
  27. def copyToArray[B >: (String, String)](xs: Array[B], start: Int): Unit
    Definition Classes
    TraversableOnce → GenTraversableOnce
  28. def copyToBuffer[B >: (String, String)](dest: Buffer[B]): Unit
    Definition Classes
    TraversableOnce
  29. def count(p: ((String, String)) ⇒ Boolean): Int
    Definition Classes
    TraversableOnce → GenTraversableOnce
  30. def drop(n: Int): Iterable[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  31. def dropRight(n: Int): Iterable[(String, String)]
    Definition Classes
    IterableLike
  32. def dropWhile(p: ((String, String)) ⇒ Boolean): Iterable[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  33. def encloses(other: GenomicSpan): Boolean

    True if this genomic span encloses the other genomic span, false otherwise.

    True if this genomic span encloses the other genomic span, false otherwise.

    Definition Classes
    GenomicSpan
  34. def end: Int
    Definition Classes
    Amplicon → GenomicSpan
    Annotations
    @inline()
  35. def ensuring(cond: (Amplicon) ⇒ Boolean, msg: ⇒ Any): Amplicon
    Implicit
    This member is added by an implicit conversion from Amplicon to Ensuring[Amplicon] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  36. def ensuring(cond: (Amplicon) ⇒ Boolean): Amplicon
    Implicit
    This member is added by an implicit conversion from Amplicon to Ensuring[Amplicon] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  37. def ensuring(cond: Boolean, msg: ⇒ Any): Amplicon
    Implicit
    This member is added by an implicit conversion from Amplicon to Ensuring[Amplicon] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  38. def ensuring(cond: Boolean): Amplicon
    Implicit
    This member is added by an implicit conversion from Amplicon to Ensuring[Amplicon] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  39. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  40. def exists(p: ((String, String)) ⇒ Boolean): Boolean
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  41. def filter(p: ((String, String)) ⇒ Boolean): Iterable[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  42. def filterNot(p: ((String, String)) ⇒ Boolean): Iterable[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  43. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  44. def find(p: ((String, String)) ⇒ Boolean): Option[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  45. def flatMap[B, That](f: ((String, String)) ⇒ GenTraversableOnce[B])(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike → FilterMonadic
  46. def flatten[B](implicit asTraversable: ((String, String)) ⇒ GenTraversableOnce[B]): Iterable[B]
    Definition Classes
    GenericTraversableTemplate
  47. def fold[A1 >: (String, String)](z: A1)(op: (A1, A1) ⇒ A1): A1
    Definition Classes
    TraversableOnce → GenTraversableOnce
  48. def foldLeft[B](z: B)(op: (B, (String, String)) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  49. def foldRight[B](z: B)(op: ((String, String), B) ⇒ B): B
    Definition Classes
    IterableLike → TraversableOnce → GenTraversableOnce
  50. def forall(p: ((String, String)) ⇒ Boolean): Boolean
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  51. def foreach[U](f: ((String, String)) ⇒ U): Unit
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike → TraversableOnce → GenTraversableOnce → FilterMonadic
  52. def formatValue(value: Any): String

    Override this method to customize how values are formatted.

    Override this method to customize how values are formatted.

    Attributes
    protected
    Definition Classes
    Metric
  53. def formatted(fmtstr: String): String
    Implicit
    This member is added by an implicit conversion from Amplicon to StringFormat[Amplicon] performed by method StringFormat in scala.Predef.
    Definition Classes
    StringFormat
    Annotations
    @inline()
  54. def genericBuilder[B]: Builder[B, Iterable[B]]
    Definition Classes
    GenericTraversableTemplate
  55. def get(name: String): Option[String]

    Gets the value of the field by name, returns None if it does not exist.

    Gets the value of the field by name, returns None if it does not exist.

    Definition Classes
    Metric
  56. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  57. def getContig(): String
    Definition Classes
    GenomicSpan → Locatable
  58. def getEnd(): Int
    Definition Classes
    GenomicSpan → Locatable
  59. def getLengthOnReference(): Int
    Definition Classes
    Locatable
  60. def getStart(): Int
    Definition Classes
    GenomicSpan → Locatable
  61. def groupBy[K](f: ((String, String)) ⇒ K): Map[K, Iterable[(String, String)]]
    Definition Classes
    TraversableLike → GenTraversableLike
  62. def grouped(size: Int): Iterator[Iterable[(String, String)]]
    Definition Classes
    IterableLike
  63. def hasDefiniteSize: Boolean
    Definition Classes
    TraversableLike → TraversableOnce → GenTraversableOnce
  64. def head: (String, String)
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  65. def headOption: Option[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  66. def identifier: String
  67. def init: Iterable[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  68. def inits: Iterator[Iterable[(String, String)]]
    Definition Classes
    TraversableLike
  69. def isEmpty: Boolean
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  70. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  71. final def isTraversableAgain: Boolean
    Definition Classes
    TraversableLike → GenTraversableLike → GenTraversableOnce
  72. def iterator: Iterator[(String, String)]

    Gets an iterator over the fields of this metric in the order they were defined.

    Gets an iterator over the fields of this metric in the order they were defined. Returns tuples of names and values

    Definition Classes
    Metric → IterableLike → GenIterableLike
  73. def last: (String, String)
    Definition Classes
    TraversableLike → GenTraversableLike
  74. def lastOption: Option[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  75. def leftEnd: Int
    Annotations
    @inline()
  76. def leftPrimerLength: Int
  77. def leftPrimerLocation: String
  78. def leftStart: Int
    Annotations
    @inline()
  79. def length: Int
    Definition Classes
    GenomicSpan
  80. def longestPrimerLength: Int
  81. def map[B, That](f: ((String, String)) ⇒ B)(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike → FilterMonadic
  82. def max[B >: (String, String)](implicit cmp: Ordering[B]): (String, String)
    Definition Classes
    TraversableOnce → GenTraversableOnce
  83. def maxBy[B](f: ((String, String)) ⇒ B)(implicit cmp: Ordering[B]): (String, String)
    Definition Classes
    TraversableOnce → GenTraversableOnce
  84. def min[B >: (String, String)](implicit cmp: Ordering[B]): (String, String)
    Definition Classes
    TraversableOnce → GenTraversableOnce
  85. def minBy[B](f: ((String, String)) ⇒ B)(implicit cmp: Ordering[B]): (String, String)
    Definition Classes
    TraversableOnce → GenTraversableOnce
  86. def mkString: String
    Definition Classes
    TraversableOnce → GenTraversableOnce
  87. def mkString(sep: String): String
    Definition Classes
    TraversableOnce → GenTraversableOnce
  88. def mkString(start: String, sep: String, end: String): String
    Definition Classes
    TraversableOnce → GenTraversableOnce
  89. def names: Seq[String]

    Get the names of the arguments in the order they were defined.

    Get the names of the arguments in the order they were defined.

    Definition Classes
    Metric
  90. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  91. def newBuilder: Builder[(String, String), Iterable[(String, String)]]
    Attributes
    protected[this]
    Definition Classes
    GenericTraversableTemplate → HasNewBuilder
  92. def nonEmpty: Boolean
    Definition Classes
    TraversableOnce → GenTraversableOnce
  93. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  94. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  95. def overlaps(other: GenomicSpan): Boolean

    True if the two genomic spans overlap, false otherwise.

    True if the two genomic spans overlap, false otherwise.

    Definition Classes
    GenomicSpan
  96. def overlaps(arg0: Locatable): Boolean
    Definition Classes
    Locatable
  97. def par: ParIterable[(String, String)]
    Definition Classes
    Parallelizable
  98. def parCombiner: Combiner[(String, String), ParIterable[(String, String)]]
    Attributes
    protected[this]
    Definition Classes
    TraversableLike → Parallelizable
  99. def partition(p: ((String, String)) ⇒ Boolean): (Iterable[(String, String)], Iterable[(String, String)])
    Definition Classes
    TraversableLike → GenTraversableLike
  100. def product[B >: (String, String)](implicit num: Numeric[B]): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  101. def reduce[A1 >: (String, String)](op: (A1, A1) ⇒ A1): A1
    Definition Classes
    TraversableOnce → GenTraversableOnce
  102. def reduceLeft[B >: (String, String)](op: (B, (String, String)) ⇒ B): B
    Definition Classes
    TraversableOnce
  103. def reduceLeftOption[B >: (String, String)](op: (B, (String, String)) ⇒ B): Option[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  104. def reduceOption[A1 >: (String, String)](op: (A1, A1) ⇒ A1): Option[A1]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  105. def reduceRight[B >: (String, String)](op: ((String, String), B) ⇒ B): B
    Definition Classes
    IterableLike → TraversableOnce → GenTraversableOnce
  106. def reduceRightOption[B >: (String, String)](op: ((String, String), B) ⇒ B): Option[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  107. def repr: Iterable[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  108. def reversed: List[(String, String)]
    Attributes
    protected[this]
    Definition Classes
    TraversableOnce
  109. def rightEnd: Int
    Annotations
    @inline()
  110. def rightPrimerLength: Int
  111. def rightPrimerLocation: String
  112. def rightStart: Int
    Annotations
    @inline()
  113. def sameElements[B >: (String, String)](that: GenIterable[B]): Boolean
    Definition Classes
    IterableLike → GenIterableLike
  114. def scan[B >: (String, String), That](z: B)(op: (B, B) ⇒ B)(implicit cbf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  115. def scanLeft[B, That](z: B)(op: (B, (String, String)) ⇒ B)(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  116. def scanRight[B, That](z: B)(op: ((String, String), B) ⇒ B)(implicit bf: CanBuildFrom[Iterable[(String, String)], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
    Annotations
    @migration
    Migration

    (Changed in version 2.9.0) The behavior of scanRight has changed. The previous behavior can be reproduced with scanRight.reverse.

  117. def seq: Iterable[(String, String)]
    Definition Classes
    Iterable → GenIterable → Traversable → GenTraversable → Parallelizable → TraversableOnce → GenTraversableOnce
  118. def size: Int
    Definition Classes
    TraversableOnce → GenTraversableOnce
  119. def sizeHintIfCheap: Int
    Attributes
    protected[collection]
    Definition Classes
    GenTraversableOnce
  120. def slice(from: Int, until: Int): Iterable[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  121. def sliding(size: Int, step: Int): Iterator[Iterable[(String, String)]]
    Definition Classes
    IterableLike
  122. def sliding(size: Int): Iterator[Iterable[(String, String)]]
    Definition Classes
    IterableLike
  123. def span(p: ((String, String)) ⇒ Boolean): (Iterable[(String, String)], Iterable[(String, String)])
    Definition Classes
    TraversableLike → GenTraversableLike
  124. def splitAt(n: Int): (Iterable[(String, String)], Iterable[(String, String)])
    Definition Classes
    TraversableLike → GenTraversableLike
  125. def start: Int
    Definition Classes
    Amplicon → GenomicSpan
    Annotations
    @inline()
  126. def stringPrefix: String
    Definition Classes
    TraversableLike → GenTraversableLike
  127. def sum[B >: (String, String)](implicit num: Numeric[B]): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  128. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  129. def tail: Iterable[(String, String)]
    Definition Classes
    TraversableLike → GenTraversableLike
  130. def tails: Iterator[Iterable[(String, String)]]
    Definition Classes
    TraversableLike
  131. def take(n: Int): Iterable[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  132. def takeRight(n: Int): Iterable[(String, String)]
    Definition Classes
    IterableLike
  133. def takeWhile(p: ((String, String)) ⇒ Boolean): Iterable[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  134. def thisCollection: Iterable[(String, String)]
    Attributes
    protected[this]
    Definition Classes
    IterableLike → TraversableLike
  135. def to[Col[_]](implicit cbf: CanBuildFrom[Nothing, (String, String), Col[(String, String)]]): Col[(String, String)]
    Definition Classes
    TraversableLike → TraversableOnce → GenTraversableOnce
  136. def toArray[B >: (String, String)](implicit arg0: ClassTag[B]): Array[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  137. def toBuffer[B >: (String, String)]: Buffer[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  138. def toCollection(repr: Iterable[(String, String)]): Iterable[(String, String)]
    Attributes
    protected[this]
    Definition Classes
    IterableLike → TraversableLike
  139. def toIndexedSeq: IndexedSeq[(String, String)]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  140. def toIterable: Iterable[(String, String)]
    Definition Classes
    IterableLike → TraversableOnce → GenTraversableOnce
  141. def toIterator: Iterator[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableOnce
    Annotations
    @deprecatedOverriding( ... , "2.11.0" )
  142. def toList: List[(String, String)]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  143. def toMap[T, U](implicit ev: <:<[(String, String), (T, U)]): Map[T, U]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  144. def toParArray: ParArray[T]
    Implicit
    This member is added by an implicit conversion from Amplicon to CollectionsHaveToParArray[Amplicon, T] performed by method CollectionsHaveToParArray in scala.collection.parallel. This conversion will take place only if an implicit value of type (Amplicon) ⇒ GenTraversableOnce[T] is in scope.
    Definition Classes
    CollectionsHaveToParArray
  145. def toSeq: Seq[(String, String)]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  146. def toSet[B >: (String, String)]: Set[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  147. def toStream: Stream[(String, String)]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableOnce
  148. def toString(): String
    Definition Classes
    Metric → TraversableLike → AnyRef → Any
  149. def toTraversable: Traversable[(String, String)]
    Definition Classes
    TraversableLike → TraversableOnce → GenTraversableOnce
    Annotations
    @deprecatedOverriding( ... , "2.11.0" )
  150. def toVector: Vector[(String, String)]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  151. def transpose[B](implicit asTraversable: ((String, String)) ⇒ GenTraversableOnce[B]): Iterable[Iterable[B]]
    Definition Classes
    GenericTraversableTemplate
    Annotations
    @migration
    Migration

    (Changed in version 2.9.0) transpose throws an IllegalArgumentException if collections are not uniformly sized.

  152. def unzip[A1, A2](implicit asPair: ((String, String)) ⇒ (A1, A2)): (Iterable[A1], Iterable[A2])
    Definition Classes
    GenericTraversableTemplate
  153. def unzip3[A1, A2, A3](implicit asTriple: ((String, String)) ⇒ (A1, A2, A3)): (Iterable[A1], Iterable[A2], Iterable[A3])
    Definition Classes
    GenericTraversableTemplate
  154. def values: Seq[String]

    Get the values of the arguments in the order they were defined.

    Get the values of the arguments in the order they were defined.

    Definition Classes
    Metric
  155. def view(from: Int, until: Int): IterableView[(String, String), Iterable[(String, String)]]
    Definition Classes
    IterableLike → TraversableLike
  156. def view: IterableView[(String, String), Iterable[(String, String)]]
    Definition Classes
    IterableLike → TraversableLike
  157. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  158. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  159. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  160. def withFilter(p: ((String, String)) ⇒ Boolean): FilterMonadic[(String, String), Iterable[(String, String)]]
    Definition Classes
    TraversableLike → FilterMonadic
  161. def withinDistanceOf(arg0: Locatable, arg1: Int): Boolean
    Definition Classes
    Locatable
  162. def zip[A1 >: (String, String), B, That](that: GenIterable[B])(implicit bf: CanBuildFrom[Iterable[(String, String)], (A1, B), That]): That
    Definition Classes
    IterableLike → GenIterableLike
  163. def zipAll[B, A1 >: (String, String), That](that: GenIterable[B], thisElem: A1, thatElem: B)(implicit bf: CanBuildFrom[Iterable[(String, String)], (A1, B), That]): That
    Definition Classes
    IterableLike → GenIterableLike
  164. def zipWithIndex[A1 >: (String, String), That](implicit bf: CanBuildFrom[Iterable[(String, String)], (A1, Int), That]): That
    Definition Classes
    IterableLike → GenIterableLike
  165. def →[B](y: B): (Amplicon, B)
    Implicit
    This member is added by an implicit conversion from Amplicon to ArrowAssoc[Amplicon] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc

Shadowed Implicit Value Members

  1. def filter(p: ((String, String)) ⇒ Boolean): TraversableOnce[(String, String)]
    Implicit
    This member is added by an implicit conversion from Amplicon to MonadOps[(String, String)] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (amplicon: MonadOps[(String, String)]).filter(p)
    Definition Classes
    MonadOps
  2. def flatMap[B](f: ((String, String)) ⇒ GenTraversableOnce[B]): TraversableOnce[B]
    Implicit
    This member is added by an implicit conversion from Amplicon to MonadOps[(String, String)] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (amplicon: MonadOps[(String, String)]).flatMap(f)
    Definition Classes
    MonadOps
  3. def map[B](f: ((String, String)) ⇒ B): TraversableOnce[B]
    Implicit
    This member is added by an implicit conversion from Amplicon to MonadOps[(String, String)] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (amplicon: MonadOps[(String, String)]).map(f)
    Definition Classes
    MonadOps
  4. def withFilter(p: ((String, String)) ⇒ Boolean): Iterator[(String, String)]
    Implicit
    This member is added by an implicit conversion from Amplicon to MonadOps[(String, String)] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (amplicon: MonadOps[(String, String)]).withFilter(p)
    Definition Classes
    MonadOps

Deprecated Value Members

  1. def /:[B](z: B)(op: (B, (String, String)) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
    Annotations
    @deprecated
    Deprecated

    (Since version 2.12.10) Use foldLeft instead of /:

  2. def :\[B](z: B)(op: ((String, String), B) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
    Annotations
    @deprecated
    Deprecated

    (Since version 2.12.10) Use foldRight instead of :\

  3. def formatValues(value: Any): String

    Attributes
    protected
    Definition Classes
    Metric
    Annotations
    @deprecated
    Deprecated

    (Since version 0.5.0) Use formatValue instead.

Inherited from Serializable

Inherited from Serializable

Inherited from Metric

Inherited from Iterable[(String, String)]

Inherited from IterableLike[(String, String), Iterable[(String, String)]]

Inherited from GenIterable[(String, String)]

Inherited from GenIterableLike[(String, String), Iterable[(String, String)]]

Inherited from Traversable[(String, String)]

Inherited from GenTraversable[(String, String)]

Inherited from GenericTraversableTemplate[(String, String), Iterable]

Inherited from TraversableLike[(String, String), Iterable[(String, String)]]

Inherited from GenTraversableLike[(String, String), Iterable[(String, String)]]

Inherited from Parallelizable[(String, String), ParIterable[(String, String)]]

Inherited from TraversableOnce[(String, String)]

Inherited from GenTraversableOnce[(String, String)]

Inherited from FilterMonadic[(String, String), Iterable[(String, String)]]

Inherited from HasNewBuilder[(String, String), Iterable[(String, String)] @scala.annotation.unchecked.uncheckedVariance]

Inherited from Product

Inherited from Equals

Inherited from GenomicSpan

Inherited from Locatable

Inherited from AnyRef

Inherited from Any

Inherited by implicit conversion CollectionsHaveToParArray from Amplicon to CollectionsHaveToParArray[Amplicon, T]

Inherited by implicit conversion MonadOps from Amplicon to MonadOps[(String, String)]

Inherited by implicit conversion any2stringadd from Amplicon to any2stringadd[Amplicon]

Inherited by implicit conversion StringFormat from Amplicon to StringFormat[Amplicon]

Inherited by implicit conversion Ensuring from Amplicon to Ensuring[Amplicon]

Inherited by implicit conversion ArrowAssoc from Amplicon to ArrowAssoc[Amplicon]

Inherited by implicit conversion alternateImplicit from Amplicon to ForceImplicitAmbiguity

Ungrouped