class IntervalListWriter extends commons.io.Writer[Interval]

Implements a writer for interval lists.

Linear Supertypes
commons.io.Writer[Interval], Closeable, AutoCloseable, AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. IntervalListWriter
  2. Writer
  3. Closeable
  4. AutoCloseable
  5. AnyRef
  6. Any
Implicitly
  1. by any2stringadd
  2. by StringFormat
  3. by Ensuring
  4. by ArrowAssoc
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Instance Constructors

  1. new IntervalListWriter(out: BufferedWriter, header: SAMFileHeader)

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. def +(other: String): String
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to any2stringadd[IntervalListWriter] performed by method any2stringadd in scala.Predef.
    Definition Classes
    any2stringadd
  4. def ++=[B <: Interval](items: scala.collection.compat.IterableOnce[B]): IntervalListWriter.this.type
    Definition Classes
    Writer
  5. def +=(item: Interval): IntervalListWriter.this.type
    Definition Classes
    Writer
  6. def ->[B](y: B): (IntervalListWriter, B)
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to ArrowAssoc[IntervalListWriter] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc
    Annotations
    @inline()
  7. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  8. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  9. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  10. def close(): Unit

    Closes the underlying writer.

    Closes the underlying writer.

    Definition Classes
    IntervalListWriter → Closeable → AutoCloseable
  11. def ensuring(cond: (IntervalListWriter) ⇒ Boolean, msg: ⇒ Any): IntervalListWriter
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to Ensuring[IntervalListWriter] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  12. def ensuring(cond: (IntervalListWriter) ⇒ Boolean): IntervalListWriter
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to Ensuring[IntervalListWriter] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  13. def ensuring(cond: Boolean, msg: ⇒ Any): IntervalListWriter
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to Ensuring[IntervalListWriter] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  14. def ensuring(cond: Boolean): IntervalListWriter
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to Ensuring[IntervalListWriter] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  15. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  16. def equals(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  17. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  18. def formatted(fmtstr: String): String
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to StringFormat[IntervalListWriter] performed by method StringFormat in scala.Predef.
    Definition Classes
    StringFormat
    Annotations
    @inline()
  19. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  20. def hashCode(): Int
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  21. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  22. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  23. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  24. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  25. val out: BufferedWriter
  26. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  27. def toString(): String
    Definition Classes
    AnyRef → Any
  28. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  29. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  30. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  31. def write(interval: Interval): Unit
    Definition Classes
    IntervalListWriter → Writer
  32. def write[B <: Interval](items: scala.collection.compat.IterableOnce[B]): Unit
    Definition Classes
    Writer
  33. def →[B](y: B): (IntervalListWriter, B)
    Implicit
    This member is added by an implicit conversion from IntervalListWriter to ArrowAssoc[IntervalListWriter] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc

Inherited from commons.io.Writer[Interval]

Inherited from Closeable

Inherited from AutoCloseable

Inherited from AnyRef

Inherited from Any

Inherited by implicit conversion any2stringadd from IntervalListWriter to any2stringadd[IntervalListWriter]

Inherited by implicit conversion StringFormat from IntervalListWriter to StringFormat[IntervalListWriter]

Inherited by implicit conversion Ensuring from IntervalListWriter to Ensuring[IntervalListWriter]

Inherited by implicit conversion ArrowAssoc from IntervalListWriter to ArrowAssoc[IntervalListWriter]

Ungrouped