SNP
GeneralStats
SampleCompare
vcf
SampleDistributions
vcf
SimpleDeletion
GeneralStats
SimpleInsertion
GeneralStats
StructuralIndel
GeneralStats
Symbolic
GeneralStats
SymbolicOrSV
GeneralStats
sampleBamInsertSize
bam
sampleBamMap
bam
sampleBamReaderMap
bam
sampleBamsInsertSize
bam
sampleId
PedigreeSample
sampleReadGroups
bam
samples
PedigreeFile GenotypeFieldCounts GenotypeStats SampleCompare
scalaListToJavaObjectArrayList
vcf
scatter
BedRecord BedRecordList
score
Feature BedRecord
sortAnyAny
utils
sorted
BedRecordList
source
Feature
squishBed
BedRecordList
start
Exon Feature Gene BedRecord
strand
Feature Gene BedRecord