MEK
NxmlSearcher
MLP_HIDDEN_SIZE
DeepLearningPolarityClassifier
MLPolarityEngine
ml
MODIFICATION_EVENTS
ReachConstants
ManualCheckModel
ml
MentionCacheValue
utils
MentionFilter
darpa
MentionJSONOps
json
MentionManager
utils
MentionOps
mentions
MentionOrdering
MentionManager
ModelGendCellLocation
ReachIMKBMentionLookups
ModelGendChemical
ReachIMKBMentionLookups
ModelGendProteinAndFamily
ReachIMKBMentionLookups
Modification
mentions
ModificationOps
json
Modifications
mentions
ModificationsOps
json
MultiValueAttribute
brat
Mutant
mentions
main
PolarityEngine
DeepLearningPolarityClassifier
DocListOverlap
NxmlIndexer
NxmlSearcher
make
AdHocIMKBFactory
TsvIMKBFactory
makeFileInKBDir
ReachKBUtils
makeFileInUserDir
ReachKBUtils
makeNamespaceId
ReachKBUtils
makePathInKBDir
ReachKBUtils
makePathInUserDir
ReachKBUtils
maskDirect
DeepLearningPolarityClassifier
maskEvent
DeepLearningPolarityClassifier
maskOption
DeepLearningPolarityClassifier
maskRecursively
DeepLearningPolarityClassifier
matches
Modification
memoryKB
IMKBLookup
mention
SimpleModification
MentionCacheValue
mentionMgr
ReachGrounder
mentionToJSON
json
mentionToStrings
MentionManager
mentions
reach
mergeEventMentions
MentionManager
mergedEvents
MentionManager
metaInfo
IMKBLookup
InMemoryKB
KBResolution
missing_charVec
DeepLearningPolarityClassifier
missing_vec
DeepLearningPolarityClassifier
mkActivation
DarpaActions
mkBinding
DarpaActions
mkBindingsFromPairs
DarpaActions
mkBioMention
DarpaActions
mkCharEmbedding
DeepLearningPolarityClassifier
mkDoc
ReachSystem
mkEmbedding
DeepLearningPolarityClassifier
mkEntities
DarpaActions
mkFriesEntry
FriesEntry
mkMentions
InstanceFinder
mkNERMentions
DarpaActions
mkNaryBinding
DarpaActions
mkOutgoing
MentionFilter
mkPrev
MentionFilter
mkRegulation
DarpaActions
mkRules
RuleReader
mkTokenConstraint
PathFinder
mkTokenConstraints
PathFinder
mkUbiquitination
DarpaActions
mkVocabs
DeepLearningPolarityClassifier
ml
polarity
model
Fragmenter
modificationEngine
ReachSystem
modificationFeatures
PhysicalEntityUtils
modificationRules
ReachSystem
modifications
Rules
Modifications
modificationsMasterFile
RuleReader
modulations
Fragmenter
molecularInteractions
Fragmenter
multiLabel
InstanceFinder
mutantProteinMatch
DarpaLinks
mutants
Modifications
mutationsToMentions
ReachSystem