object QualityEncoding

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  1. final def !=(arg0: Any): Boolean
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  2. final def ##(): Int
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  3. final def ==(arg0: Any): Boolean
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  4. val all: List[QualityEncoding]

    All possible values of quality encoding.

  5. final def asInstanceOf[T0]: T0
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  6. def clone(): AnyRef
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  7. final def eq(arg0: AnyRef): Boolean
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  8. def equals(arg0: Any): Boolean
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  9. def finalize(): Unit
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  10. final def getClass(): Class[_]
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  11. def hashCode(): Int
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  12. final def isInstanceOf[T0]: Boolean
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  13. final def ne(arg0: AnyRef): Boolean
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  14. final def notify(): Unit
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  15. final def notifyAll(): Unit
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  16. final def synchronized[T0](arg0: ⇒ T0): T0
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  17. def toString(): String
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  18. final def wait(): Unit
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  19. final def wait(arg0: Long, arg1: Int): Unit
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  20. final def wait(arg0: Long): Unit
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  21. object Illumina extends QualityEncoding with Product with Serializable

    Quality encoding for Illumina, 1.3 <= version < 1.8; Phred scaling + 64.

  22. object Solexa extends QualityEncoding with Product with Serializable

    Quality encoding for the legacy Solexa scores used pre version 1.3.

    Quality encoding for the legacy Solexa scores used pre version 1.3. Q[Solexa] = −10 * log10[(P/1-P)]

  23. object Standard extends QualityEncoding with Product with Serializable

    Quality encoding for Sanger & Illumina 1.8+; Phred scaling + 33.

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