Packages

object Tab6InFormatter extends InFormatterCompanion[Fragment, Fragment, FragmentDataset, Tab6InFormatter] with Serializable

InFormatter companion that creates an InFormatter that writes Bowtie tab6 format.

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Serializable, Serializable, InFormatterCompanion[Fragment, Fragment, FragmentDataset, Tab6InFormatter], AnyRef, Any
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  1. Tab6InFormatter
  2. Serializable
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  4. InFormatterCompanion
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  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  4. def apply(gDataset: FragmentDataset): Tab6InFormatter

    Builds an Tab6InFormatter to write Bowtie tab6 format.

    Builds an Tab6InFormatter to write Bowtie tab6 format.

    gDataset

    GenomicDataset of Fragments. Used to get HadoopConfiguration.

    returns

    Returns a new Tab6InFormatter.

    Definition Classes
    Tab6InFormatter → InFormatterCompanion
  5. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  6. def clone(): AnyRef
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    protected[java.lang]
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    @native() @throws( ... )
  7. final def eq(arg0: AnyRef): Boolean
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    AnyRef
  8. def equals(arg0: Any): Boolean
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  9. def finalize(): Unit
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    protected[java.lang]
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  10. final def getClass(): Class[_]
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  11. def hashCode(): Int
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  12. final def isInstanceOf[T0]: Boolean
    Definition Classes
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  13. final def ne(arg0: AnyRef): Boolean
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  14. final def notify(): Unit
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    @native()
  15. final def notifyAll(): Unit
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  16. final def synchronized[T0](arg0: ⇒ T0): T0
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  17. def toString(): String
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  18. final def wait(): Unit
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    @throws( ... )
  19. final def wait(arg0: Long, arg1: Int): Unit
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  20. final def wait(arg0: Long): Unit
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Inherited from Serializable

Inherited from Serializable

Inherited from InFormatterCompanion[Fragment, Fragment, FragmentDataset, Tab6InFormatter]

Inherited from AnyRef

Inherited from Any

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