case class PhaseBlock extends GenomicSpan with Product with Serializable

Linear Supertypes
Serializable, Serializable, Product, Equals, GenomicSpan, Locatable, AnyRef, Any
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Inherited
  1. PhaseBlock
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. GenomicSpan
  7. Locatable
  8. AnyRef
  9. Any
Implicitly
  1. by any2stringadd
  2. by StringFormat
  3. by Ensuring
  4. by ArrowAssoc
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Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. def +(other: String): String
    Implicit
    This member is added by an implicit conversion from PhaseBlock to any2stringadd[PhaseBlock] performed by method any2stringadd in scala.Predef.
    Definition Classes
    any2stringadd
  4. def ->[B](y: B): (PhaseBlock, B)
    Implicit
    This member is added by an implicit conversion from PhaseBlock to ArrowAssoc[PhaseBlock] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc
    Annotations
    @inline()
  5. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  6. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  7. def clone(): AnyRef
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  8. def contains(arg0: Locatable): Boolean
    Definition Classes
    Locatable
  9. val contig: String
    Definition Classes
    PhaseBlock → GenomicSpan
  10. def contigsMatch(arg0: Locatable): Boolean
    Definition Classes
    Locatable
  11. def encloses(other: GenomicSpan): Boolean

    True if this genomic span encloses the other genomic span, false otherwise.

    True if this genomic span encloses the other genomic span, false otherwise.

    Definition Classes
    GenomicSpan
  12. val end: Int
    Definition Classes
    PhaseBlock → GenomicSpan
  13. def ensuring(cond: (PhaseBlock) ⇒ Boolean, msg: ⇒ Any): PhaseBlock
    Implicit
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  14. def ensuring(cond: (PhaseBlock) ⇒ Boolean): PhaseBlock
    Implicit
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  15. def ensuring(cond: Boolean, msg: ⇒ Any): PhaseBlock
    Implicit
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  16. def ensuring(cond: Boolean): PhaseBlock
    Implicit
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  17. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  18. def finalize(): Unit
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  19. def formatted(fmtstr: String): String
    Implicit
    This member is added by an implicit conversion from PhaseBlock to StringFormat[PhaseBlock] performed by method StringFormat in scala.Predef.
    Definition Classes
    StringFormat
    Annotations
    @inline()
  20. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
  21. def getContig(): String
    Definition Classes
    GenomicSpan → Locatable
  22. def getEnd(): Int
    Definition Classes
    GenomicSpan → Locatable
  23. def getLengthOnReference(): Int
    Definition Classes
    Locatable
  24. def getStart(): Int
    Definition Classes
    GenomicSpan → Locatable
  25. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  26. def length: Int
    Definition Classes
    GenomicSpan
  27. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  28. final def notify(): Unit
    Definition Classes
    AnyRef
  29. final def notifyAll(): Unit
    Definition Classes
    AnyRef
  30. def overlaps(other: GenomicSpan): Boolean

    True if the two genomic spans overlap, false otherwise.

    True if the two genomic spans overlap, false otherwise.

    Definition Classes
    GenomicSpan
  31. def overlaps(arg0: Locatable): Boolean
    Definition Classes
    Locatable
  32. val start: Int
    Definition Classes
    PhaseBlock → GenomicSpan
  33. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  34. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  35. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  36. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  37. def withinDistanceOf(arg0: Locatable, arg1: Int): Boolean
    Definition Classes
    Locatable
  38. def →[B](y: B): (PhaseBlock, B)
    Implicit
    This member is added by an implicit conversion from PhaseBlock to ArrowAssoc[PhaseBlock] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc

Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from GenomicSpan

Inherited from Locatable

Inherited from AnyRef

Inherited from Any

Inherited by implicit conversion any2stringadd from PhaseBlock to any2stringadd[PhaseBlock]

Inherited by implicit conversion StringFormat from PhaseBlock to StringFormat[PhaseBlock]

Inherited by implicit conversion Ensuring from PhaseBlock to Ensuring[PhaseBlock]

Inherited by implicit conversion ArrowAssoc from PhaseBlock to ArrowAssoc[PhaseBlock]

Ungrouped